[gmx-users] Regarding the atomic contact map in gromacs

Dorj Bat batdorj230 at yahoo.com
Thu Nov 21 09:36:04 CET 2019


Dear Gromacs users,
My simulation system contains pentamer of a short peptide. I would like to analysis the atomic contact map. However, gmx mdmat can give us the contact map of residues, not the atomic map. Is it possible to get this contact information. Please suggest me possible internal or external tools.

Bat


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