[gmx-users] water deletor script error

[Justin Lemkul]

On 10/6/19 10:14 AM, Ayesha Fatima wrote:
> Dear All,
> I used Dr. Justin's perl script to delete water from the membrane. It gives
> an error of illegal division by zero. has anyone experienced it. i looked
> at the error line
> it goes like this
>
> my $middle_z = $total_z / $nmiddle;
>
> I tried a few atom numbers but same error. i wonder if others had som eerror

This means you have not correctly defined atoms, but in the absence of 
your actual command I can't help much further. Email me off-list for 
help with this problem as it is not a GROMACS issue.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Assistant Professor
Office: 301 Fralin Hall
Lab: 303 Engel Hall

Virginia Tech Department of Biochemistry
340 West Campus Dr.
Blacksburg, VA 24061

jalemkul at vt.edu | (540) 231-3129
http://www.thelemkullab.com

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