[gmx-users] Fatal error: no domain decomposition

[Patricia Saenz Méndez]

 Hi Justin,
thanks a lot. I followed the link and modify rcon accordingly. The problem
was fixed.
Thank you once again.
Cheers,

/P

El sáb., 19 oct. 2019 a las 16:34, Justin Lemkul (<jalemkul at vt.edu>)
escribió:

>
>
> On 10/18/19 6:35 AM, Patricia Saenz Méndez wrote:
> > Hi!
> > I am trying to run a simple MD simulation as usual, but with this system
> I
> > have got the same error message:
> >
> >
> >
> >
> >
> >
> > *Fatal error:There is no domain decomposition for 160 ranks that is
> > compatible with thegiven box and a minimum cell size of 1.02425 nmChange
> > the number of ranks or mdrun option -rcon or -dds or your
> LINCSsettingsLook
> > in the log file for details on the domain decomposition*
>
> Please consult
>
> http://manual.gromacs.org/current/user-guide/run-time-errors.html#there-is-no-domain-decomposition-for-n-ranks-that-is-compatible-with-the-given-box-and-a-minimum-cell-size-of-x-nm
>
> One cannot decompose any given system over any arbitrary number of
> processors.
>
> -Justin
>
> --
> ==================================================
>
> Justin A. Lemkul, Ph.D.
> Assistant Professor
> Office: 301 Fralin Hall
> Lab: 303 Engel Hall
>
> Virginia Tech Department of Biochemistry
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>
> jalemkul at vt.edu | (540) 231-3129
> http://www.thelemkullab.com
>
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