[gmx-users] RNA md simulation

[Justin Lemkul]

On 2/14/20 5:20 AM, Priyanka Singh wrote:
> Hi can anyone help with the problem of terminal end notation for charmm36
> ff for RNA molecule to generate .gro file usind gromac-2019.3

The standard 5'-OH and 3'-OH are 5TER and 3TER.

-Justin

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Justin A. Lemkul, Ph.D.
Assistant Professor
Office: 301 Fralin Hall
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Virginia Tech Department of Biochemistry
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jalemkul at vt.edu | (540) 231-3129
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