[gmx-developers] cvs version: pull code

David van der Spoel spoel at xray.bmc.uu.se
Mon Sep 22 07:57:16 CEST 2008

Paul Whitford wrote:
> I tried to use the cvs code with the pull code.  I use the flags -pi and 
> -pn and I give file names, but the pull code does not get employed. I 
> tried the exact same command with v3.3.3, and it worked    Have the 
> flags changed between 3.3.3 to the cvs versions?   I thought I was just 
> using an old cvs version, so I downloaded the newest cvs version, but it 
> won't compile.  I get the following error
> make[4]: *** No rule to make target `atom_comm.c', needed by 
> `atom_comm.lo'.  Stop.
You can remove atom_comm.c from src/gmxlib/Makefile.am. No idea who 
added this.

The input for the pull code is now completely in the mdp file. There is 
html documentation in the distribution (share/html/)

> It appears pull.c was modified 2 days ago, so perhaps the first bug was 
> fixed. Is anyone else having trouble compiling the most recent version?  
> thanks
> -Paul
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David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205. Fax: +4618511755.
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se

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