[gmx-developers] LJ and Coloumb per atom per group

Pieter van 't Hof pieter.van.t.hof at logica.com
Tue Jul 28 10:33:00 CEST 2009


Sorry, I forgot to add that this concerns only the short range versions 
of LJ and Coloumb

-------- Forwarded Message --------
From: Pieter van 't Hof <pieter.van.t.hof at logica.com>
Reply-to: Discussion list for GROMACS development
<gmx-developers at gromacs.org>
To: gmx-developers at gromacs.org
Subject: [gmx-developers] LJ and Coloumb per atom per group
Date: Tue, 28 Jul 2009 10:02:13 +0200

Hello,

I would like to know where the LJ interaction is calculated (separately
6 and 12 if possible) and coloumb forces per atom.

The idea is to generate an overview of the per-atom LJ and Coloumb
forces per energy group (So, for example, knowing of each atom in the
Ligand what its LJ6, LJ12 and CLB values are)

I am a experienced programmer, but quite new in the architecture of
Gromacs. A short hint to the correct place of calculation (and
preferably where additional atom information (such as number and group)
is available) should be enough :)

Thanks in advantage

Pieter 
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