[gmx-developers] compiling from tarball on ubuntu
szilard.pall at cbr.su.se
Wed Oct 20 00:22:23 CEST 2010
I've just tried on Ubuntu 10.04 x86_64 with gcc 4.4.3 and gcc 4.3.4 as
well. Compiled from the 4.0.5 tarball from the website, ran a
simulations with a few systems (including SPC/E water box) and
everything worked just fine.
On Tue, Oct 19, 2010 at 4:41 PM, Anton Feenstra <feenstra at few.vu.nl> wrote:
> We're having problems here compiling gromacs from source (tarballs). We're
> trying 4.0.5 since that matches our local development tree. Compilation
> seems to go fine, but mdrun segfaults at step 0 (in nsgrid_core), and it
> also fails on the water tutorial (same segv).
> I wasn't able to find any confirmation on the mailing lists, or anywhere on
> the gromacs pages, of this issue. Stock ubuntu mdrun does run on the same
> tpr. Tried it on ubuntu 9.10 (karmic) and 10.04 (lucid).
> Can anyone confirm this problem, and any hint on how to proceed?
> _____________ _______________________________________________________
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> | _ _ ___,| K. Anton Feenstra |
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