akohlmey at cmm.chem.upenn.edu
Tue Jul 12 17:54:31 CEST 2011
On Tue, Jul 12, 2011 at 11:45 AM, waleed zalloum
<waleed_zalloum at yahoo.com> wrote:
> Dear All,
> I am a final year PhD student at the university of Manchester, UK. I want to
> use GPU GROMACS to simulate a system consisted of DNA and protein. I was
> wondering, I have a computer with a GeForce 310M with CUDA, on the GROMACS
> web page this GPU is not listed in the compatible ones. Can I use this GPU
> by any means to run the MD simulation using GROMACS?
CUDA compatible GPUs are listed on this page.
keep in mind however, that CUDA compatible doesn't
necessarily translate into a huge acceleration. how
much speedup you get depends on the GPU architecture,
clock rates and memory bandwidth and number of
multiprocessors in the GPU.
> Thank you
> Waleed A. Zalloum,
> MSc of pharmacy and Pharmaceutical sciences,
> Molecular Modeling
> School of Pharmacy and Pharmaceutical Sciences,
> Faculty of Medical and Human Sciences,
> The University of Manchester
> Manchester, UK
> Third year PhD student.
> E-mail: waleed_zalloum at yahoo.com
> Mobile: +44(0)7863763084
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Dr. Axel Kohlmeyer akohlmey at gmail.com
Institute for Computational Molecular Science
Temple University, Philadelphia PA, USA.
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