[gmx-developers] mdp option names

[Alexey Shvetsov]

Justin A. Lemkul писал 20.10.2011 22:23:
> Aren't the hyphen and underscore interchangeable, such that either is
> already accepted?

Both accepted in input but output may contain its mixed like some 
options will contain '_' while others '-'
this patches only replaces '_' to '-' in output option names. In input 
files both variants will work

>
> -Justin
>
> Alexey Shvetsov wrote:
>> Hi all!
>> Seems it will be good idea to have all mdp option names consistent. 
>> In its
>> current state some of them has '-' in its names like E-t while some 
>> other
>> options has '_' in their names like init_step. It will be good if 
>> all options
>> will have same naming scheme like only '_' in names or only '-' in 
>> its names.
>> Also it will simplyfy mdp file generation and parsing  by external 
>> software.
>> I prepared two patches in gerrit
>> https://gerrit.gromacs.org/229 <- it replaces '_' to '-' in mdp 
>> option names
>> https://gerrit.gromacs.org/229 <- it changes mdp.html and 
>> mdp_opt.html
>> PS currently we use such mdp file parser for gromacs grid ui in nnn 
>> grid
>>
>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
> ========================================

-- 
Best Regards,
Alexey 'Alexxy' Shvetsov
Petersburg Nuclear Physics Institute, Russia
Department of Molecular and Radiation Biophysics
Gentoo Team Ru
Gentoo Linux Dev
mailto:alexxyum at gmail.com
mailto:alexxy at gentoo.org
mailto:alexxy at omrb.pnpi.spb.ru