[gmx-developers] Gromacs 5.0-beta1 install fails on windows

Erik Lindahl erik.lindahl at scilifelab.se
Sat Dec 7 23:22:03 CET 2013


Ah, my bad Mirco - I shouldn’t be doing email when I’m tired saturday evening ;-)

I had completely missed that you were testing the beta, but it seems Szilard & Roland figured things out.

Cheers,

Erik

On 07 Dec 2013, at 22:40, Roland Schulz <roland at utk.edu> wrote:

> The cmake -E create_symlink isn't available on Windows. Either we need to force GMX_SYMLINK_OLD_BINARY_NAMES to be false on Windows or we need to make copies (instead of symlinks) on Windows.
> 
> Mirco, can you verify that the install works correctly if you set GMX_SYMLINK_OLD_BINARY_NAMES to false?
> 
> Roland
> 
> 
> On Sat, Dec 7, 2013 at 2:56 PM, Mirco Wahab <mirco.wahab at chemie.tu-freiberg.de> wrote:
> the build step creating gmx.exe works fine, but the executeable is
> created in:
> 
>         [build_dir]/bin/Release/gmx.exe
> 
> the next step (the install) expects the executeable
> gmx.exe located here:
> 
>         [build_dir]/bin/gmx.exe
> 
> and fails with:
> 28>  Creating symlinks for alternative binary names
> 28>  Error copying file (if different) from "[build_dir]/bin/gmx.exe" to
> "[build_dir]/bin/mdrun.exe".
> 28>  Error copying file (if different) from "[build_dir]/bin/gmx.exe" to
> "[build_dir]/bin/gmxcheck.exe".
> 28>  Error copying file (if different) from "[build_dir]/bin/gmx.exe" to
> [build_dir]/bin/gmxdump.exe".
> 28>  Error copying file (if different) from [build_dir]/bin/gmx.exe" to
> "[build_dir]/bin/grompp.exe".
> ...
> 
> 
> manually copying gmx.exe to [build_dir]/bin/ and rebuilding solves
> this, for now.
> --
> Gromacs Developers mailing list
> 
> * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-developers_List before posting!
> 
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> 
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-developers or send a mail to gmx-developers-request at gromacs.org.
> 
> 
> 
> 
> 
> 
> 
> -- 
> ORNL/UT Center for Molecular Biophysics cmb.ornl.gov
> 865-241-1537, ORNL PO BOX 2008 MS6309
> -- 
> Gromacs Developers mailing list
> 
> * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-developers_List before posting!
> 
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> 
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-developers or send a mail to gmx-developers-request at gromacs.org.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-developers/attachments/20131207/fe567337/attachment-0001.html>


More information about the gromacs.org_gmx-developers mailing list