[gmx-developers] vmdio and external source

[David van der Spoel]

On 2014-02-10 08:31, Teemu Murtola wrote:
> It appears broken. The CMake code is in gmxlib/CMakeLists.txt, but
> doesn't work since vmdio.c has been moved to fileio/.

Thanks, I uploaded a patch
https://gerrit.gromacs.org/#/c/3124/2
I think that before the move turning off plugins did not work at all, 
but now it does.

>
> On Feb 10, 2014 9:25 AM, "David van der Spoel" <spoel at xray.bmc.uu.se
> <mailto:spoel at xray.bmc.uu.se>> wrote:
>
>     How is the compilation of the external source code for vmd plugins
>     controlled?
>
>     E.g.:
>     % nm libgromacs.a | grep vmddlclose
>                       U _vmddlclose
>
>     in other words the routine vmddlclose is undefined as the
>     external/vmd_molfile is not compiled in.
>
>     I don't see any directives about external in the CMakeLists.txt file.
>
>     This is a problem as some linkers want to resolve everything at
>     compile time (Fedora 20 gcc (GCC) 4.8.2 20131212 (Red Hat 4.8.2-7)).
>
>     Clues?
>     --
>     David van der Spoel, Ph.D., Professor of Biology
>     Dept. of Cell & Molec. Biol., Uppsala University.
>     Box 596, 75124 Uppsala, Sweden. Phone: +46184714205
>     <tel:%2B46184714205>.
>     spoel at xray.bmc.uu.se <mailto:spoel at xray.bmc.uu.se>
>     http://folding.bmc.uu.se
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-- 
David van der Spoel, Ph.D., Professor of Biology
Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205.
spoel at xray.bmc.uu.se    http://folding.bmc.uu.se