[gmx-developers] How to put two molecules inside the simulation box with a control on their DISTANCE and ANGLE
mark.j.abraham at gmail.com
Tue Feb 13 07:39:10 CET 2018
This list is for discussing issues pertaining to GROMACS development,
rather than usage. Please ask again on the gmx-users mailing list.
On Tue, Feb 13, 2018 at 12:42 AM Armin Solemanifar <
armin.solemanifar at gmail.com> wrote:
> Dear Gromacs users,
> I'm trying to put two peptides inside the simulation box and have the
> ability to rotate them to face each other in a particular way before
> starting the simulation. I only know how to put them randomly in the
> simulation box.
> My second question is how to put them in a certain distance from each
> other in the beginning as well.
> Gromacs Developers mailing list
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-developers_List before
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> * For (un)subscribe requests visit
> or send a mail to gmx-developers-request at gromacs.org.
-------------- next part --------------
An HTML attachment was scrubbed...
More information about the gromacs.org_gmx-developers