[gmx-users] About RPM files
David van der Spoel
spoel at xray.bmc.uu.se
Mon Aug 20 15:06:19 CEST 2001
On Mon, 20 Aug 2001, Alan Wilter Sousa da Silva wrote:
>I've downloaded GMX for linux/X86, and installed the rpm packages. My
>system is a cluster with four machines running Mandrake 8.0 in a Athlon
>1GHz with Codine architecture (100Mbits Ethernet).
>-First question, the RPM files are optimised yet to my Athlon processor?
>Would I better compile again GMX to my system?
>-Has anyone runned GMX in a Codine parallel architecture with MPI?
I don't know what codine is. Is that a Mandrake clustering solution?
It should work out of the box at maximum speed. Both GROMACS and FFTW will
install in /usr/local, while LAM installs in /usr. That means you have to
install at least LAM on all machines, while the other packages could be
shared via NFS, if you have that installed.
Dr. David van der Spoel, Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576, 75123 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://zorn.bmc.uu.se/~spoel
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