[gmx-users] gmx3.1.4 on OSX

[Valentin Gogonea]

Thank you Choon-Peng,

I recompiled 3.1.4 as you suggested, but I still get this segmentation 
fault error. I tried to run pdb2gmx in the tutor/gmxdemo folder and the 
only thing printed out in the output.pdb2gmx file is:

:-)  G  R  O  M  A  C  S  (-:


I  assume that pdb2gmx does not use fftw, so I don't think that 
recompiling it will help.

Valentin


On Wednesday, July 31, 2002, at 10:35 PM, Choon Peng wrote:

> Hi Valentin,
>
>   I've just successful ran Gromacs on our iMac G4 800MHz with OSX 
> 10.1.5.
> Compiled FFTw with "--host=powerpc --enable-float"
> and Gromacs 3.1.4 with "--disable-shared --without-x".
> I used the default cc (GCC 2.96) for both codes. Have to use /bin/bash 
> to
> configure Gromacs.
> When you run grompp, have to modify /lib/cpp (for Linux) to simply
> /usr/bin/cpp.
> Ran villin benchmark which gave 2150 ps/day (< reported on Gromacs
> website).
>
> Give "-disable-shared" a try.
> Hope this is useful.
>
> regards,
> Choon-Peng CHNG
> Scientific Programmer
> BioInformatics Institute (BII)
> 21, Heng Mui Keng Terrace, Rm 03-53, Singapore 119613
> Tel (O): (65) 68746173
> Fax (O): (65) 67781250
> www.bii.a-star.edu.sg/~cpchng
>
> On Wed, 31 Jul 2002, Valentin Gogonea wrote:
>
>> Hi Chris,
>>
>> Thank you for the list of instructions. I followed step-by-step your
>> instructions, but I still get segmentation fault. I also tried what Sid
>> suggested. Actually the default in the configure file is --enable-
>> static=yes
>>
>> By the way I have fftw installed through fink, but it works fine with
>> gromacs 3.1.1. I have no clue what can be the problem.
>>
>> Thanks for help.
>>
>> Valentin
>>
>
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