[gmx-users] mac osX compilation problems

David spoel at xray.bmc.uu.se
Sat Dec 21 15:55:22 CET 2002


On Sat, 2002-12-21 at 03:51, kiran boggavarapu wrote:
> Hi All:
> 
> I go a porblem while compiling GROMACS 3.0 on e-mac G4
> with mac osX 
> first i run ./conigure file, loaded Fftw etc.
> everything seem to be fine but at the end the
> following error is displayed

did you try running make at all? Maybe it isn't harmful. Otherwise you
have to check the archives, and for macos certainly get the latest
version 3.1.4

> 
> "
> config.status: creating Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating src/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating src/gmxlib/Makefile
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> config.status: creating include/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating include/types/Makefile
> sed: sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid
> command code k
> 48: /tmp/cs4444-11503/subs-1.sed: unescaped newline
> inside substitute pattern
> config.status: creating src/mdlib/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating src/kernel/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating src/tools/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating src/ngmx/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating src/contrib/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating scripts/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating admin/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/tutor/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/tutor/gmxdemo/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/tutor/nmr1/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/tutor/nmr2/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/tutor/water/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/tutor/speptide/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: sed: 3:
> /tmp/cs4444-11503/subs-2.sed: invalid command code k
> unescaped newline inside substitute pattern
> config.status: creating share/template/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/top/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/html/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/html/images/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating share/html/online/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating man/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating man/man1/Makefile
> sed: 48: /tmp/cs4444-11503/subs-1.sed: unescaped
> newline inside substitute pattern
> sed: 3: /tmp/cs4444-11503/subs-2.sed: invalid command
> code k
> config.status: creating src/config.h
> config.status: src/config.h is unchanged
> 
> GROMACS is ready to compile.
> 
> * Binaries and libraries for this host will be
> installed in
>     /usr/local/gromacs/powerpc-apple-darwin5.5/bin
>     /usr/local/gromacs/powerpc-apple-darwin5.5/lib
>   and shared data will placed in
>     /usr/local/gromacs/share
>   (You can set this with --prefix, --exec-prefix and
> --datadir)
> "
> 
> how to slove this!
> 
> thanks in advance
> 
> happy holidays and merry chirstms
> 
> -kiran boggavarapu
> 
> 
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-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576,  	75123 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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