[gmx-users] Extracting coordinates from a trajectory!

[Anton Feenstra]

Peter Fojan wrote:
> 
> Dear all,
> does anybody know of a way how to extract the coordinates of  one group
> or atom from a protein side chain from a trajectory file. I want to
> follow this group through a trajectory. Thanks for your help,

Try g_traj. 
Else, try trjconv and extract the coordinates from .gro or .pdb
output...

-- 
Groetjes,

Anton
 ________ ___________________________________________________________
|        | Anton Feenstra                                            |
| .      | Dept. of Pharmacochemistry - Free University Amsterdam    |
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