February 2002 Archives by thread

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Starting: Fri Feb 1 13:53:50 CET 2002
Ending: Thu Feb 28 23:57:50 CET 2002
Messages: 216

• [gmx-users] Running with > 5 NODES   Mehmet Suezen
• [gmx-users] Manganese parameters   Lieven Buts
• [gmx-users] make links error?   Rui Qiao
  • [gmx-users] make links error?   David van der Spoel
    • [gmx-users] make links error?   Rui Qiao
• [gmx-users] GROMACS on Mac OS X   Donald E. Elmore
  • [gmx-users] GROMACS on Mac OS X   Erik Lindahl
  • [gmx-users] GROMACS on Mac OS X   Yiannis Nicolis
• [gmx-users] Switches   Andrea Bernini
  • [gmx-users] Switches   David van der Spoel
• [gmx-users] trjconv   Jocelyne Vreede
  • [gmx-users] trjconv   David van der Spoel
• [gmx-users] PRODRG server down / moved / firewalled ?   Mikko Huhtala MOL
  • [gmx-users] PRODRG server down / moved / firewalled ?   Daan van Aalten
• [gmx-users] exclusions in topological file   jozef hritz
  • [gmx-users] exclusions in topological file   David van der Spoel
• [gmx-users] Re: Force field parameters for GROMACS   David van der Spoel
• [gmx-users] surface tension   paloureiro
  • [gmx-users] surface tension   David van der Spoel
• [gmx-users] alpha c rmsd   santini
  • [gmx-users] alpha c rmsd   David van der Spoel
• [gmx-users] MPI Compilation of GROMACS   Xiang(Simon) WANG
  • [gmx-users] MPI Compilation of GROMACS   Erik Lindahl
• [gmx-users] Surface tension II   paloureiro
• [gmx-users] md.log question   Rui Qiao
  • [gmx-users] md.log question   David van der Spoel
    • [gmx-users] md.log question   Rui Qiao
• [gmx-users] position restraints   Bert de Groot
  • [gmx-users] position restraints   Anton Feenstra
• [gmx-users] sugars in Gromacs..   T. Zaraiskaya
• [gmx-users] Simulated Annealing   Anton Feenstra
  • [gmx-users] Simulated Annealing   Anton Feenstra
• [gmx-users] ERROR: Twin-range neighbour searching (NS) with simple NS algorithm notimplemented   Anton Feenstra
  • [gmx-users] ERROR: Twin-range neighbour searching (NS) with simple NS algorithm notimplemented   Mehmet Suzen
• [gmx-users] traj comparison   giacomo de mori
  • [gmx-users] traj comparison   Anton Feenstra
• [gmx-users] MSD again   Lars Poulsen
  • [gmx-users] MSD again   Periole Xavier
  • [gmx-users] MSD again   Periole Xavier
    • [gmx-users] MSD again   Lars Poulsen
• [gmx-users] energy minimization   Rui Qiao
• [gmx-users] Freeze groups and pressure   Anton Feenstra
• [gmx-users] PPPM & Poisson   Anton Feenstra
• [gmx-users] Brownian dynamics   Michel Fodje
  • [gmx-users] Brownian dynamics   David van der Spoel
• [gmx-users] surface tension II   Pedro L. Loureiro
• [gmx-users] do_dssp   Marcos Villarreal
  • [gmx-users] do_dssp   Erik Lindahl
    • [gmx-users] do_dssp   w.j.schravendijk at students.pharm.uu.nl
• [gmx-users] Brownian dynamics]   Michel Fodje
  • [gmx-users] Brownian dynamics]   Anton Feenstra
    • [gmx-users] Brownian dynamics]   Michel Fodje
      • [gmx-users] Brownian dynamics]   Christian Kandt
      • [gmx-users] Brownian dynamics]   David L. Bostick
      • [gmx-users] Brownian dynamics]   Michel Fodje
      • [gmx-users] Brownian dynamics]   David van der Spoel
      • [gmx-users] Brownian dynamics]   Michel Fodje
  • [gmx-users] Brownian dynamics]   David van der Spoel
• [gmx-users] itp file   jozef hritz
• [gmx-users] heme and TML   Patricia Soto
  • [gmx-users] heme and TML   Christian Kandt
    • [gmx-users] heme and TML   Christian Kandt
  • [gmx-users] heme and TML   David van der Spoel
• [gmx-users] Magic Number Error   Christofer Hofsäß
• [gmx-users] g_density -ed   Christofer Hofsäß
  • [gmx-users] g_density -ed   David van der Spoel
• [gmx-users] Extracting coordinates from a trajectory!   Peter Fojan
  • [gmx-users] Extracting coordinates from a trajectory!   Anton Feenstra
    • [gmx-users] Extracting coordinates from a trajectory!   David van der Spoel
• [gmx-users] extracting coordinates!   Peter Fojan
• [gmx-users] box size with pressure coupling   Lynne E. Bilston
  • [gmx-users] box size with pressure coupling   Erik Lindahl
  • [gmx-users] box size with pressure coupling   Erik Lindahl
  • [gmx-users] box size with pressure coupling   Anton Feenstra
• [gmx-users] software for single crystal XRD pattern   Makoto Yoneya
• [gmx-users] MPICH and scaling performance   Anton Feenstra
  • [gmx-users] MPICH and scaling performance   David van der Spoel
• [gmx-users] Re: memory problems...   Anton Feenstra
  • [gmx-users] Re: memory problems...   Anton Feenstra
• [gmx-users] xtc C programming   Eviatar Tron
  • [gmx-users] xtc C programming   David van der Spoel
• [gmx-users] Gromacs 3.1 beta released   Erik Lindahl
• [gmx-users] fail at Grid routine?   Makoto Yoneya
  • [gmx-users] fail at Grid routine?   Anton Feenstra
• [gmx-users] endcapping   w.j.schravendijk at students.pharm.uu.nl
  • [gmx-users] endcapping   Anton Feenstra
  • [gmx-users] endcapping   David van der Spoel
• [gmx-users] lipid parameters   Andrea Hombrecher
  • [gmx-users] lipid parameters   Erik Lindahl
• [gmx-users] endcapping   w.j.schravendijk at students.pharm.uu.nl
  • [gmx-users] endcapping   Anton Feenstra
    • [gmx-users] endcapping   w.j.schravendijk at students.pharm.uu.nl
      • [gmx-users] endcapping   David van der Spoel
      • [gmx-users] endcapping   w.j.schravendijk at students.pharm.uu.nl
      • [gmx-users] endcapping   Anton Feenstra
      • [gmx-users] endcapping   David van der Spoel
• [gmx-users] Checking Lincs Warnings   Anton Feenstra
• [gmx-users] endcapping   Anton Feenstra
• dgsolv.dat missing? (was Re: [gmx-users] Gromacs 3.1 beta released)   nicolis at guideo.fr
  • dgsolv.dat missing? (was Re: [gmx-users] Gromacs 3.1 beta released)   Erik Lindahl
• [gmx-users] topology file for pyrophosphate group??   Shang-Te Danny Hsu
  • [gmx-users] topology file for pyrophosphate group??   Anton Feenstra
• [gmx-users] Re: gmx-users digest, Vol 1 #138 - 13 msgs   Shang-Te Danny Hsu
  • [gmx-users] Re: gmx-users digest, Vol 1 #138 - 13 msgs   Anton Feenstra
• [gmx-users] phorbol   jozef hritz
• [gmx-users] itp file   jozef hritz
  • [gmx-users] itp file   Anton Feenstra
    • [gmx-users] itp file   jozef hritz
      • [gmx-users] itp file   Anton Feenstra
      • [gmx-users] itp file   David van der Spoel
  • [gmx-users] itp file   Daan van Aalten
• [gmx-users] "trjconv -pbc whole" and SPC water   Michael Patra
• [gmx-users] Fatal Error in mdrun after position restraint completed.   Tracy Louise Bolton
  • [gmx-users] Fatal Error in mdrun after position restraint completed.   David van der Spoel
• [gmx-users] "trjconv -pbc whole" and SPC water   Berk Hess
  • [gmx-users] "trjconv -pbc whole" and SPC water   Erik Lindahl
• [gmx-users] Re: Gromacs vs HEME group   David van der Spoel
• [gmx-users] problem on a G3 (Gromacs 3.1 beta released)   nicolis at guideo.fr
  • [gmx-users] problem on a G3 (Gromacs 3.1 beta released)   David van der Spoel
    • [gmx-users] problem on a G3 (Gromacs 3.1 beta released)   Erik Lindahl
• [gmx-users] Trajectory analysis   Oleg Katchanov
  • [gmx-users] Trajectory analysis   Bert de Groot
• [gmx-users] Brownian dynamics]   Berk Hess
  • [gmx-users] Brownian dynamics   Michel Fodje
• [gmx-users] do_dssp   paloureiro at biof.ufrj.br
  • [gmx-users] do_dssp   Erik Lindahl
    • [gmx-users] do_dssp   Alan Wilter Sousa da Silva
      • [gmx-users] do_dssp   Erik Lindahl
• [gmx-users] binutils   Milton Taidi Sonoda
  • [gmx-users] binutils   Erik Lindahl
    • [gmx-users] binutils   Milton Taidi Sonoda
• [gmx-users] dipole correction in 3.1-beta   David L. Bostick
  • [gmx-users] dipole correction in 3.1-beta   Erik Lindahl
• [gmx-users] New loop.   Mehmet Suezen
  • [gmx-users] New loop.   David van der Spoel
• [gmx-users] Help with make_ndx and   Giorgos Karvounis
  • [gmx-users] Help with make_ndx and   David van der Spoel
    • [gmx-users] Help with make_ndx and   Anton Feenstra
  • [gmx-users] (no subject)   Nguyen Hoang Phuong
    • [gmx-users] (no subject)   David van der Spoel
      • [gmx-users] (no subject)   Nguyen Hoang Phuong
      • [gmx-users] (no subject)   Rainer Boeckmann
• [gmx-users] c6,c12 versus sigma,epsilon   Thad Harroun
• [gmx-users] New loop   Berk Hess
  • [gmx-users] New loop   Mehmet Suezen
• [gmx-users] Re: c6,c12 versus sigma,epsilon   Berk Hess
  • [gmx-users] reaction field   w.j.schravendijk at students.pharm.uu.nl
  • [gmx-users] Re: c6,c12 versus sigma,epsilon   Rui Qiao
• [gmx-users] dipole correction in 3.1-beta   Erik Lindahl
  • [gmx-users] dipole correction in 3.1-beta   David L. Bostick
• [gmx-users] Re: c6,c12 versus sigma,epsilon   Berk Hess
• [gmx-users] reaction field: lots of warnings and errors   w.j.schravendijk at students.pharm.uu.nl
• [gmx-users] reaction field: lots of warnings and errors   Berk Hess
  • [gmx-users] (no subject)   Nguyen Hoang Phuong
    • [gmx-users] (no subject)   Bert de Groot
    • [gmx-users] (no subject)   Anton Feenstra
  • [gmx-users] reaction field: lots of warnings and errors   w.j.schravendijk at students.pharm.uu.nl
• Ang: [gmx-users] Temp increase   Peter Ahlström
• [gmx-users] Different temperature of protein`s patch   alexander yakovenko
  • [gmx-users] Different temperature of protein`s patch   w.j.schravendijk at students.pharm.uu.nl
• [gmx-users] Help with make_ndx and   Peter Ahlström
• [gmx-users] Help with make_ndx and   Anton Feenstra
• [gmx-users] GROMACS 3.1 beta / gmx_sumd   Andrew Horsfield
• [gmx-users] problem with pdm2gmx   hugo verli
  • [gmx-users] problem with pdm2gmx   jozef hritz
    • [gmx-users] problem with pdm2gmx   Anton Feenstra
• [gmx-users] saving traj of one atom...   Giorgos Karvounis
  • [gmx-users] saving traj of one atom...   Erik Lindahl
    • [gmx-users] saving traj of one atom...   Anton Feenstra
• [gmx-users] GROMOS96   hugo verli
  • [gmx-users] GROMOS96   David van der Spoel
• [gmx-users] temperature too low   w.j.schravendijk at students.pharm.uu.nl
  • [gmx-users] temperature too low   David van der Spoel
    • [gmx-users] temperature too low   w.j.schravendijk at students.pharm.uu.nl
      • [gmx-users] temperature too low   Anton Feenstra
      • [gmx-users] temperature too low   David van der Spoel
• [gmx-users] No genion in 3.1beta RPMS   Michel Fodje
  • [gmx-users] No genion in 3.1beta RPMS   David van der Spoel
• Ang: Re: [gmx-users] Help with make_ndx and   Anton Feenstra
• [gmx-users] g_angle   hugo verli
  • [gmx-users] g_angle   David van der Spoel
• [gmx-users] Nonsymmetric Potentials   Mark T. Lusk
  • [gmx-users] Nonsymmetric Potentials   David van der Spoel
• [gmx-users] Re: different trajectories   David van der Spoel
• [gmx-users] error in PRODRG server   hugo verli
• [gmx-users] united CF2, CF3 parameters   Makoto Yoneya
  • [gmx-users] zinc force field parameters   jozef hritz
    • [gmx-users] zinc force field parameters   w.j.schravendijk at students.pharm.uu.nl
      • [gmx-users] zinc force field parameters   Christian Kandt
• [gmx-users] Protonation process   Dmitry Kovalsky
• [gmx-users] (no subject)   ôÏËÁÒÅ× áÌÅËÓÅÊ
  • [gmx-users] (no subject)   Anton Feenstra
• [gmx-users] DPPC molecule, grompp, ffgmx.rtp   Tokarev Alexey
• [gmx-users] Implicit solvent   Andrew Horsfield
  • [gmx-users] Implicit solvent   Erik Lindahl
    • [gmx-users] Implicit solvent   David van der Spoel
• [gmx-users] pull code   David L. Bostick
• [gmx-users] ffG43a1.hdb for what?   Yuguang Mu
  • [gmx-users] ffG43a1.hdb for what?   Nguyen Hoang Phuong
  • [gmx-users] ffG43a1.hdb for what?   David van der Spoel
• [gmx-users] mdrun - ci   ôÏËÁÒÅ× áÌÅËÓÅÊ
  • [gmx-users] mdrun - ci   Andrew Horsfield
    • [gmx-users] GROMOS vs. GROMACS   Nguyen Hoang Phuong
      • [gmx-users] GROMOS vs. GROMACS   David van der Spoel
      • [gmx-users] GROMOS vs. GROMACS   Nguyen Hoang Phuong
      • [gmx-users] GROMOS vs. GROMACS   David van der Spoel
      • [gmx-users] GROMOS vs. GROMACS   Nguyen Hoang Phuong
• [gmx-users] modeling DNA-peptide interactions in Gromacs   David van der Spoel
• [gmx-users] GROMOS vs. GROMACS   Berk Hess
• [gmx-users] make a cyclic peptides   Yuguang Mu
  • [gmx-users] make a cyclic peptides   David van der Spoel
• [GMX-USERS] Pull Code   Justin MacCallum
  • [GMX-USERS] Pull Code   David L. Bostick
    • [GMX-USERS] Pull Code   Justin MacCallum
• [GMX-USERS] Pull Code   Erik Lindahl
  • [GMX-USERS] Pull Code   Justin MacCallum

Last message date: Thu Feb 28 23:57:50 CET 2002
Archived on: Thu Nov 14 11:59:30 CET 2013

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