[gmx-users] endcapping
Anton Feenstra
feenstra at chem.vu.nl
Mon Feb 18 15:56:53 CET 2002
w.j.schravendijk at students.pharm.uu.nl wrote:
>
> I meant: Add a fluorescent molecule in place of the NH2 at the end. I
> guess the solution for that will be something silimar to this NH2 problem,
> so it should be possible.
In principle yes, but you can't do that using the .tdb entries, these
are too limited for that. In stead you'll have to add an additional
residue to the .rtp and .hdb files...
I'm lost as to which of your other questions are or are not already
answered. Please ask any remaining questions again... ;-)
--
Groetjes,
Anton
________ ___________________________________________________________
| | Anton Feenstra |
| . | Dept. of Pharmacochemistry - Free University Amsterdam |
| |---- | De Boelelaan 1083 - 1081 HV Amsterdam - The Netherlands |
| |---- | Tel: +31 20 44 47608 - Fax: +31 20 44 47610 |
| ' __ | Feenstra at chem.vu.nl - http://www.chem.vu.nl/afdelingen/FAR|
| / \ |-----------------------------------------------------------|
| ( ) | Dept. of Biophysical Chemistry - University of Groningen |
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| __ | Tel +31 50 363 4327 - Fax +31 50 363 4800 |
| / \ | K.A.Feenstra at chem.rug.nl - http://md.chem.rug.nl/~anton |
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