[gmx-users] Fatal Error in mdrun after position restraint completed.
Tracy Louise Bolton
tracy.bolton at uea.ac.uk
Tue Feb 19 16:25:56 CET 2002
Hi.
I'm new to this game and I need help.
I keep getting the message Fatal Error: ci = -1 should be in 0.. -1
[FILE nsgrid.c, LINE 214] during mdrun after the position restraint has
been completed.
I'm using a sm peptide in SOL. Some of the input parameters are below.
The run generates 29,700 steps then produces the error message. Why? A
colleague thinks it might be a bug as he cannot see any problems with
temp, energy etc before the error. Program is running single precision.
If anyone can help I'd be grateful.
Ta
Tracy
Input Parameters:
integrator = md
nsteps = 40000
ns_type = Grid
nstlist = 10
ndelta = 2
bDomDecomp = FALSE
decomp_dir = 0
nstcomm = 1
nstlog = 25
nstxout = 500
nstvout = 500
nstfout = 0
nstenergy = 25
nstxtcout = 25
init_t = 0
delta_t = 0.002
xtcprec = 1000
nkx = 0
nky = 0
nkz = 0
pme_order = 4
ewald_rtol = 1e-05
epsilon_surface = 0
optimize_fft = FALSE
ePBC = xyz
bUncStart = FALSE
etc = Berendsen
epc = Berendsen
epctype = Isotropic
tau_p = 1
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