[gmx-users] Help with make_ndx and

Giorgos Karvounis gk237 at cam.ac.uk
Thu Feb 21 12:47:30 CET 2002


My name is Giorgos and i am a new Gromacs user. My problem is that i
need to extract and follow the coordinates of a specific aton in a
protein (e.g C1) or a group (e.g. carbonyl) but i'm not comfortable with
the index.ndx or make_ndx command... Any help will highly appreciated!



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