[gmx-users] Re: gmx-users digest, Vol 1 #298 - 11 msgs

Vishal Vaidyanathan vvishal at stanford.edu
Wed Jul 3 14:41:28 CEST 2002

Hi Users,
   Thanks for all your suggestions. After Lynne's mail, I tried using "Cpu
Burn-in" from


to test the system's stability as regards temperature and they seem to be

   Following Mehmet's and Marcos' suggestions, I also tried installing
lam-6.5.6, but now if I run mpirun -np 2,  lamd dies and mdrun does not
start simulation at all - mdrun fails somewhere early during initialising.
I guess mdrun has to be recompiled with the new libs. I was avoiding
recompiling because I don't get the same performance as the rpm binaries
when I compile it on Suse 8.0 (different gcc versions probably).

   Thanks a lot for all your help!

On Wed, 3 Jul 2002, Lynne E. Bilston wrote:

> Vishal,
> Try checking the temperature in your machines. I had a few crashes like
> this when my dual athlons were running too hot (AC was accidentally being
> switched off at night).
> -Lynne

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