[gmx-users] unable to compile from source

Peter C. Lai sirmoo at cowbert.2y.net
Wed Jul 3 16:49:39 CEST 2002


On Wed, Jul 03, 2002 at 09:53:03AM +0200, Bert de Groot wrote:
> "Peter C. Lai" wrote:
> 
> > I tried installing the gromacs binaries from gromacs.org, but
> > it complains about finding the libraries (even though they
> > exist in the search path)
> 
> Did you edit and source the GMXRC.csh?
> (in .../mips-sgi-irix6.5/r10000/bin)
> 

Yes. I customized and sourced the GMXRC.csh


> else try
> 
> setenv LD_LIBRARY_PATH /wherever/yourpath/mips-sgi-irix6.5/r10000/lib/
> 
> (or the equivalent for your shell)
> 

Yes i did that too. What happens is I try running pdb2gmx or something
and it returns "unable to map soname libgmx.so.3 to:
/usr/local/gromacs-3.1/mips-sgi-irix6.5/r10000/lib/libgmx.so.3"

> Bert
> 
> ____________________________________________________________________________
> Dr. Bert de Groot
> 
> Max Planck Institute for Biophysical Chemistry
> Theoretical molecular biophysics group
> Am Fassberg 11 
> 37077 Goettingen, Germany
> 
> tel: +49-551-2011306, fax: +49-551-2011089
> 
> email: bgroot at gwdg.de
> http://www.mpibpc.gwdg.de/abteilungen/071/bgroot
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-- 
Peter C. Lai
University of Connecticut
Dept. of Molecular and Cell Biology | Undergraduate Research Assistant
Yale University School of Medicine
Center for Medical Informatics | Research Assistant
http://cowbert.2y.net/




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