[gmx-users] Segmentation fault.

[Erik Lindahl]

dr.horsfield at physics.org wrote:
> Hi,
> 
> I get a segmentaion fault when I use mdrun or mdrun_d with PME (but not
> cutoff). I have tried two Linux boxes and two versions of gromacs (3.1 and
> 3.1.4) and two input files. Both machines use RH 7.2. I compiled fftw from
> source for one machine, and installed it from the RPM on the other
> (fftw-2.1.3-8).
> 
> If anyone wants to try the smaller of the two jobs, I can provide the tpr 
> file (136876 bytes). It does not take long to die ....
> 
> Anyone got any suggestions as to what can be done?
> 

Hi Andrew,

What type of box are you using? We did fix an error for very skewed 
triclinic boxes recently.

Cheers,

Erik