[gmx-users] Groups (Protein vs. Protein)

David van der Spoel spoel at xray.bmc.uu.se
Mon Nov 18 16:53:07 CET 2002


On Mon, 2002-11-18 at 16:02, Alan Wilter Sousa da Silva wrote:
> 
> Hi List,
> 
> 	I can share in groups (protein, drug, sol, ion) without problem.
> However, now, insted of having a drug group I had a different protein
> (substrate) that interact with the other.  Whatever I tried I always got a
> whole Protein in the index, when I'd like to have another name to the
> substrate.  How could I achieve this?
use make_ndx,
input is a bit terse but it works.
> 
> Sincerely,
> 
> -----------------------
> Alan Wilter S. da Silva
> -----------------------
>  Laboratório de Física Biológica
>   Instituto de Biofísica Carlos Chagas Filho
>    Universidade do Brasil/UFRJ
>     Rio de Janeiro, Brasil
> 
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-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576,  	75123 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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