[gmx-users] GROMACS on Mandrake
David van der Spoel
spoel at xray.bmc.uu.se
Thu Sep 5 13:27:39 CEST 2002
On Thu, 2002-09-05 at 13:27, Mehmet Suezen wrote:
> Dmitry Kovalsky wrote:
> > Hi there
> > Does anybidy installed gromacs-mpi rpm's on Mandrake Linux?
> > Firstly I used ALT linux (it is Russian Mandrake) and my cluster
> > (4x2cpuAthlons) in few minutes hanged up without any log and warnings. After
> > changing to usual Mandrake all the problems disappeared when I tried to run at
> > one node. We believed that it was in kernel problem. But when I used 4 nodes
> > the main machine hangs up again.
> > Does it have sense to rebuild gromacs for Mandrake?
> Hi Dimitry,
> Compilation from scratch would be easier and convenient. This is what I
> did and worked
> fine up to now.
It could be that mandrake comes with a different version of LAM
installed. If you mix libraries of different versions anything can
happen. Recompile is the way to go...
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Dr. David van der Spoel, Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576, 75123 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://zorn.bmc.uu.se/~spoel
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