[gmx-users] Dihedral angle restraints in NMR refinement
David van der Spoel
spoel at xray.bmc.uu.se
Mon Sep 16 11:49:28 CEST 2002
On Mon, 2002-09-16 at 10:27, Chris Spronk wrote:
> Hi there,
>
> I am trying to use GROMACS for NMR refinement purposes and am wondering
> if GROMACS has an option to include NMR derived dihedral angle
> restraints (similar to the distance restraints, with zero force between
> an upper and lower bound for the angle, a harmonic potential outside
> these bounds)
No it does not. Best you can do straight off is use normal impropers,
which have a pure harmonic well.
--
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, Biomedical center, Dept. of Biochemistry
Husargatan 3, Box 576, 75123 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://zorn.bmc.uu.se/~spoel
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
More information about the gromacs.org_gmx-users
mailing list