[gmx-users] protein jumps 10nm south in the ~20000th frame

[Bert de Groot]

Paul Barrett wrote:
> 
> thanks david
> 
> yes (as I wrote) the jump is about the size of my box (9nm).
> 
> looks like I have to just live with it for my visualisation.
> 

or use:
trjconv -pbc nojump 

prior to visualisation

--

Bert

____________________________________________________________________________
Dr. Bert de Groot

Max Planck Institute for Biophysical Chemistry
Theoretical molecular biophysics group
Am Fassberg 11 
37077 Goettingen, Germany

tel: +49-551-2011306, fax: +49-551-2011089

email: bgroot at gwdg.de
http://www.mpibpc.gwdg.de/abteilungen/071/bgroot
____________________________________________________________________________