[gmx-users] trjconv

Xavier Periole periole at inka.mssm.edu
Mon Aug 25 19:33:01 CEST 2003

You have to create an index with the protein (in the default index):

make_ndx -f conf-protein 

generates index.ndx 

after that you do

trajconv -f traj.xtc -n index.ndx -o traj-prot.xtc 

the program asks you what you want in the output traj 


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