[gmx-users] install problem

David van der Spoel spoel at xray.bmc.uu.se
Tue Dec 2 11:13:01 CET 2003


On Tue, 2003-12-02 at 08:41, amay wrote:
> Dear Sir:
>    According to your instruction, i succeed in stalling LAM-7.03 in the directory of /sjtu2/users/amay1975/cxm/lam. However when i want to install gromacs3.1, the problem still exist. I dont know why.Thanks to your reply.
> 
>    1. cd gromacs-3.1
>    2. setenv CPPFLAGS -I/sjtu2/users/amay1975/cxm/fftw/include
>    3. setenv LDFALGS -L/sjtu2/users/amay1975/cxm/fftw/lib
               ^^^^^^^
that's a type, and you do not have mpicc in your path

>    4. ./configure --enable-float --enable-mpi --prefix=/sjtu2/users/amay1975/cxm/gromacs
> 
> checking build system type... mips-sgi-irix6.5
> checking host system type... mips-sgi-irix6.5
> checking for a BSD compatible install... config/install-sh -c
> checking whether build environment is sane... yes
> checking for awk... awk
> checking whether make sets ${MAKE}... yes
> checking for cc... cc
> checking for C compiler default output... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for executable suffix... 
> checking for object suffix... o
> checking whether we are using the GNU C compiler... no
> checking whether cc accepts -g... yes
> checking for style of include used by make... GNU
> checking dependency style of cc... sgi
> checking for f77... f77
> checking whether we are using the GNU Fortran 77 compiler... no
> checking whether f77 accepts -g... yes
> checking for mpxlc... no
> checking for mpicc... no
> checking for mpcc... no
> checking for hcc... no
> checking whether the MPI cc command works... configure: error: Cannot compile and link MPI code with cc
> SGI 7% setenv CC mpicc
> SGI 8% ./configure --enable-float --enable-mpi --prefix=/sjtu2/users/amay1975/cxm/gromacs
> checking build system type... mips-sgi-irix6.5
> checking host system type... mips-sgi-irix6.5
> checking for a BSD compatible install... config/install-sh -c
> checking whether build environment is sane... yes
> checking for awk... awk
> checking whether make sets ${MAKE}... yes
> checking for C compiler default output... configure: error: C compiler cannot create executables
> 
>             amay
>             amay1975 at 163.com
> 
> 
> _______________________________________________
> gmx-users mailing list
> gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++




More information about the gromacs.org_gmx-users mailing list