[gmx-users] editconf problem!!or rtp problem!!

[David van der Spoel]

On Thu, 2003-02-20 at 11:40, Anton Feenstra wrote:
> nanyu101 wrote:
> > 
> > Dear gmx-users,
> >  I have tried to make a hole on popc128a.pdb that was downloaded
> > from Dr.Tieleman's web,I just run editconf -f popc128a.pdb -o popc.gro.
> > And then I run editconf -f popc.gro -o popc.pdb.When I viewed the
> > popc.pdb,the structure was destroyed,I think that my rtp file of
> > popc is wrong.rtp file was created myself in Gromos96 43a2x.Do you
> > have a rtp file for popc?
> 
> Are the atoms in your .pdb/.gro file in the same order as those in the .rtp?
> 
Editconf does not use the rtp file at all...


> -- 
> Groetjes,
> 
> Anton
>  _____________ _______________________________________________________
> |             |                                                       |
> |  _   _  ___,| K. Anton Feenstra                                     |
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-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell & Mol. Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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