[gmx-users] possible compatibility issue

[David van der Spoel]

On Fri, 2003-02-28 at 13:15, Luciane Vieira de Mello wrote:
> 
> Dear all,
> 
> I've been using gmx 3.14 happily on RedHat7.2.  Now, after upgrading to
> RH8.0 I find that while editconf and tpbconv still work, I can;t do the
> dynamics.  I give the usual command
> 
> /usr/bin/mpirun C /usr/local/bin/mdrun_mpi -s restart1.tpr -v >&
> restart1.lis
probably different libraries for either LAM or FFTW check by running:
ldd `which mdrun`

> 
> And get the following
> 
> -rw-r--r--    1 mello    desenv          0 Feb 28 09:05 restart1.lis
> -rw-------    1 mello    desenv     364544 Feb 28 09:05 core.13715
> 
> i.e. a binary core file and an empty lis file.
> 
> This does seem to be related to the version of RedHat since I get the same
> on two different machines, server and workstation, that run 8.0.  Machines
> with 7.2 continue fine.
> 
> Can anyone help?
> 
> Thanks in advance
> 
> Luciane
> 
> 
> +-------------------------------------------------------------------------+
> |                  Dra. Luciane Vieira de Mello Rigden                    |
> | e-mail: mello at cenargen.embrapa.br                                       |
> | Embrapa Recursos Geneticos e Biotecnologia                              |
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> 
> 
> 
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-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell & Mol. Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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