[gmx-users] sridhar: How to include topologies for unusual/phosphorylated residues occurring within the protein chain.

Tsjerk Wassenaar t.a.wassenaar at chem.rug.nl
Fri May 16 10:38:01 CEST 2003


Hi Sridhar,

Graham Smith has added such residues to the ffG43a1 forcefield. You 
might want to check
http://gromacs.org/topologies/force_fields.php

Hope it helps...
Cheers,

Tsjerk


Mr.Sridhar wrote:

>
>In my current work I want to do simulation of a protein containing
>PhosphoSerine. Regarding this I went through the Article "Gromacs Tutorial
>for Drug-Enzyme Complex" which has shown clearly step-by-step how to
>include new topologies for drug/ligand molecules.
>

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