[gmx-users] Three solvent boxs upload to gromacs topologies(CCl4 CHCl3 CH2Cl2)!
PeiQuan Chen
gromacs at 163.com
Tue May 20 17:05:01 CEST 2003
Dear gmx-user,
I have upload three opls-aa or opls-ua rigid model solvent boxs of ccl4,chcl3,ch2cl2. to the gromacs topologies:
http://www.gromacs.org/topologies/molecules.php
We frist thank you for David,Erik,Christoph Freudenberger's help for developing these boxs.
I have tested the boxs extensivly now and post the results as follow:
CCl4 512 molecules box:
MD expt.
Density: 1572 g/l 1594 g/l
DHvap 32.38 KJ/mol 32.54 KJ/mol
CHCl3 512 molecules box:
MD expt.
Density: 1457 g/l 1498 g/l
DHvap 30.96 KJ/mol 31.4 KJ/mol
CH2Cl2 512 molecules box:
MD expt.
Density: 1311 g/l 1325 g/l
DHvap 28.55 KJ/mol 29.0 KJ/mol
All the expt. DHvap values refer to
Majer, V.; Svoboda, V., Enthalpies of Vaporization of Organic Compounds: A Critical Review and Data Compilation, Blackwell
Scientific Publications, Oxford, 1985, 300.
All the expt. Density are take from chemfinder.cambridgesoft.com site
The itp files are suitable for using oplsaa force field. When It come to other force field, you can easily implement by
changing the L-J parameters from sigma and epsilon to C6 and C12.
Sincerely yours
----
PeiQuan Chen
________________________________________________________________________
PeiQuan Chen Department of Chemistry, Nankai University
WeiJin Road 94, TianJin, 300071, P.R.China
phone: (86)2223506728 Mobile Phone: (+86)13920675030
gromacs at 163.com
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