Fwd: [gmx-users] D-form amino acids

[Christoph Freudenberger]

Regina R. Monaco, Ph.D. wrote:
> Hi Daan-
> 
>     Well, **I** am not worried, but GROMACS won't accept the 
> calculation.  I am assuming the reason is that the program is not 
> certain what the  atom types are, what charges to use, and how to index 
> the molecule. At  least, thats what the error messages indicate  :>
> 

Sound more like somethings wrong with the topology rather then
the 'UNK' residues.
Please post the error message and a few lines of the coordinate file.

regards
-- 
Christoph Freudenberger
Abt. Organische Chemie I AK Siehl - Uni Ulm -Tel: ++49-731-502-2785