dpinis1 at lsu.edu
Tue Aug 10 18:15:49 CEST 2004
i tried to generate a monolayer of a membrane of 128 molecules.
I took a single molecule with fifty atoms and then I used genbox to
multiply it to 128,I got monolayer but the head to head distance is too
weird, though i give 0.7 as head to head distance they look very far
apart.when I read manual about genbox I understood that it stacks
simulation boxes with molecules and thus they are very far apart,am I right
Now please anyone suggest how to get the distance between molecules very
close with head to head distance very low and all the molecules being in
same simulation box.Can I use genbox multiply and allow all the molecules
being in same box with head to head distance what i mention.........If yes
how,what are staements to be given.
Please help me out in this regard..............
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