[gmx-users] GDP topology

[Michal Kolinski]

Hi all!

I need to simulate rhodopsin in lipid bilayer with G protein + GDP

I'm not certain if the topology file  (charges)  for GDP that I have obtained using PRODRG

server is right for me.  I plan to use (ffgmx_lipids.tar.gz)  ffgmx force field modified 

to use with lipids from gromacs site.  (At the beginning I did a short simulation of  GDP 

in box of water only and everything seemed fine).  Please give me some comment and

thank you in advice. 
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