[gmx-users] movie making

David van der Spoel spoel at xray.bmc.uu.se
Mon Jan 5 16:07:01 CET 2004


On Mon, 2004-01-05 at 13:35, Eric Jakobsson wrote:
> Anybody have thoughts or experiences with Pymol
> http://pymol.sourceforge.net/  molecular visualization and modeling
> tool?

I use it almost exclusively for static pictures now.

> 
> At 09:39 AM 1/5/2004 +0200, you wrote:
> > Dear Itamar, gmx users, 
> > 
> > Regarding the low resolution, follow the vmd mailing list archive,
> > though I don't think there's a real solution - the movies I made
> > always seemed to look much better in VMD. 
> > 
> > Regarding the speed - the only real solution I found is to put more
> > frames into my movie. If you can use a movie playing program on your
> > pc than  you can sort it out by choosing the speed in it, but that
> > won't work in presentations. 
> > 
> > Good luck in Hollywood, 
> > Ran. 
> > 
> > Itamar Kass wrote: 
> > >    Hi all, I am trying to create a movie fron trjectory using vmd
> > > 1.8.2, and I have two main problems.  The first is the low
> > > resultion of the output mpg and the second is the high speed it
> > > rolls.  Does anyone know how to overcome it?
> > > Thanks, Itamar.
> > > ********************************************
> > > Computers are like airconditioners... They don't work well with
> > > Windows open.
> > > ********************************************
> > > ===========================================
> > > | Itamar Kass
> > > | The Alexander Silberman
> > > | Institute of Life Sciences
> > > | Department of Biological Chemistry
> > > | The Hebrew University, Givat-Ram
> > > | Jerusalem, 91904, Israel
> > > | Tel: +972-(0)2-6585146
> > > | Fax: +972-(0)2-6584329
> > > | Email: ikass at cc.huji.ac.il
> > > | Homepage:
> > > http://www.ls.huji.ac.il/~membranelab/itamar/itamar_homepage.html
> > > ============================================
> > 
> > 
> > -- 
> > ------------------------------------------------------
> > Ran Friedman
> > Laser laboratory for fast reactions in biology
> > Department of biochemistry
> > Faculty of life sciences
> > Tel-Aviv university
> > 972-3-6409824
> > ------------------------------------------------------
> >   
> ---------------------------------
> Eric Jakobsson, Ph.D.
> Professor, Department of Molecular and Integrative Physiology, and of
> Biochemistry
> Senior Research Scientist, National Center for Supercomputing
> Applications
> Professor, Beckman Institute for Advanced Science and Technology
> 4021 Beckman Institute, mc251
> University of Illinois, Urbana, IL 61801
> ph. 217-244-2896       fax 217-244-2909
> (Currently on leave to the National Institutes of Health in Bethesda,
> Maryland, to be Director of the NIGMS Center for Bioinformatics and
> Computational Biology and Chair of the NIH Biomedical Information
> Science and Technology Initiative Consortium, but maintaining my
> research lab at Illinois by periodic commuting.  My usual schedule is
> four days a week at NIH and three days a week at Illinois.)
-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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