[gmx-users] 2-Dimensional simulation by Gromacs

David spoel at xray.bmc.uu.se
Tue Jul 6 08:14:41 CEST 2004

On Mon, 2004-07-05 at 21:15, ysun at mie.utoronto.ca wrote:
> Dear users,
> When I used same  mdp file  and top file, but different gro files, one for 2-D
> plane another for 3-D box cell.
> It works that Gromacs is  suitable for simulation of  3-D box cell.
> However,  I tried to do a 2-D simualtion by Gromacs, but it failed: Fatal error:
> File em1.tpr not found.
> What problem is it? Appreciate your advice.
grompp failed, probably due to your input being inconsistent. check the
error messages.

> Thanks.
> Sun
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David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel

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