July 2004 Archives by subject
Starting: Thu Jul 1 04:39:28 CEST 2004
Ending: Sat Jul 31 11:15:44 CEST 2004
Messages: 489
- [gmx-users] (no subject)
A. A. Jeyaprakash
- [gmx-users] (no subject)
anwar at cdfd.org.in
- [gmx-users] (no subject)
yinjun
- [gmx-users] (no subject)
SLN Prasad Reddy
- [gmx-users] (no subject)
Nuno R. L. Ferreira
- [gmx-users] (no subject)
Daejoong Kim
- [gmx-users] (no subject)
Berk Hess
- [gmx-users] 1-4 Coulomb interaction
Jee E Rim
- [gmx-users] 2-Dimensional simulation by Gromacs
ysun at mie.utoronto.ca
- [gmx-users] 2-Dimensional simulation by Gromacs
David
- [gmx-users] [Fwd: Regd vaccum forcefield.]
David van der Spoel
- [gmx-users] Re: [gmx-developers] Re: long range interactions dependon bonds
Berk Hess
- [gmx-users] Re: [gmx-developers] Re: long range interactions depend on bonds ?
Michael Brunsteiner
- [gmx-users] A problem about H-bonds
tenghl
- [gmx-users] A problem about H-bonds
Andrey V Golovin
- [gmx-users] A question about Periodic boundary condition
tenghl
- [gmx-users] A question about Periodic boundary condition
Tsjerk Wassenaar
- [gmx-users] Re:A question about Periodic boundary condition
tenghl
- [gmx-users] Re:A question about Periodic boundary condition
Tsjerk Wassenaar
- [gmx-users] abnormal termination while mdrun_mpi
pandey at bioinfo.ernet.in
- [gmx-users] About LJ parameters: sigma/epsilon vs. c6/c12
Daejoong Kim
- [gmx-users] Re: about PLP cofactor
pankaj at cdfd.org.in
- [gmx-users] Re: about PLP cofactor
David
- [gmx-users] Add new topologies - article ( Arlan )
Arlan Goncalves
- [gmx-users] Alinging beta sheets
Gaurav Porwal
- [gmx-users] Alinging beta sheets
Nuno R. L. Ferreira
- [gmx-users] alter the box
Dmitry Kovalsky
- [gmx-users] alter the box
David van der Spoel
- [gmx-users] announcing normal mode analysis web server ElNemo
Karsten Suhre
- [gmx-users] Another boring imaging question
david.evans at ulsop.ac.uk
- [gmx-users] Another boring imaging question
Berk Hess
- [gmx-users] atom type error
Dinesh Pinisetty
- [gmx-users] atom type error
Christopher Tran
- [gmx-users] atom type error
Dinesh Pinisetty
- [gmx-users] atom type error
Haerterich, Steffen
- [gmx-users] atom types
Dinesh Pinisetty
- [gmx-users] atom types
Dallas Warren
- [gmx-users] atom types
Dinesh Pinisetty
- [gmx-users] atom types
Dallas Warren
- [gmx-users] atoms
Dinesh Pinisetty
- [gmx-users] atoms
Anton Feenstra
- [gmx-users] atoms
Dinesh Pinisetty
- [gmx-users] atoms
Anton Feenstra
- [gmx-users] RE: Benzene again2
nicolas Dinter
- [gmx-users] RE: Benzene again2
David
- [gmx-users] box type
sadhna
- [gmx-users] box type
Choon Peng
- [gmx-users] Bugs in calculation of virial
Vincent Ballenegger
- [gmx-users] Bugs in calculation of virial
Berk Hess
- [gmx-users] calculate rotation between monomers
Ruben M Buey
- [gmx-users] calculate rotation between monomers
Dallas Warren
- [gmx-users] cannot compile
David
- [gmx-users] cannot compile
tenghl
- [gmx-users] cannot compile
tenghl
- [gmx-users] cannot compile parallel version
Andre Farias de Moura
- [gmx-users] cannot compile parallel version
David
- [gmx-users] cannot compile parallel version
Oliver Beckstein
- [gmx-users] cannot compile parallel version
Andre Farias de Moura
- [gmx-users] cannot compile parallel version
Andre Farias de Moura
- [gmx-users] cannot compile parallel version
Andre Farias de Moura
- [gmx-users] cannot compile parallel version
Andre Farias de Moura
- [gmx-users] cannot compile parallel version
David
- [gmx-users] cannot compile parallel version
David
- [gmx-users] cannot compile parallel version
David
- [gmx-users] cannot compile parallel version
Oliver Beckstein
- [gmx-users] cannot compile parallel version
David
- [gmx-users] Career prospects
Vivek Raut
- [gmx-users] Center
Raghunadha Reddy Burri
- [gmx-users] Center
Anton Feenstra
- [gmx-users] Center
Nuno R. L. Ferreira
- [gmx-users] center of mass [question]
Sergio Modesto Vechi
- [gmx-users] center of mass [question]
David
- [gmx-users] Compiling Gromacs 3.2.1 on IBM p690+ Power4
Fiona Reid
- [gmx-users] Re: Compiling Gromacs 3.2.1 on IBM p690+ Power4
Pim Schravendijk
- [gmx-users] Re: Compiling Gromacs 3.2.1 on IBM p690+ Power4
Berk Hess
- [gmx-users] Re: Compiling Gromacs 3.2.1 on IBM p690+ Power4
Sekwan Oh
- [gmx-users] Compiling on Opteron
Amil Anderson
- [gmx-users] Compiling on Opteron
Pim Schravendijk
- [gmx-users] Compiling on Opteron
Pierfrancesco Zuccato
- [gmx-users] Compiling on power4, still struggling
Pim Schravendijk
- [gmx-users] compiling paralel version
Andre Farias de Moura
- [gmx-users] compiling paralel version
Andrei Neamtu
- [gmx-users] concoord problem
John Simms
- [gmx-users] concoord problem
Bert de Groot
- [gmx-users] Constraint algorithm error
nicolas Dinter
- [gmx-users] Constraint algorithm error
Anton Feenstra
- [gmx-users] Constraint algorithm error
nicolas Dinter
- [gmx-users] Constraint algorithm error
Anton Feenstra
- [gmx-users] Constraint algorithm error
nicolas Dinter
- [gmx-users] Constraint algorithm error
Anton Feenstra
- [gmx-users] continue run on different platform
Kay Gottschalk
- [gmx-users] continue run on different platform
Berk Hess
- [gmx-users] copyright question
Andrey V Golovin
- [gmx-users] copyright question
Andrey V Golovin
- [gmx-users] CRY-ED question
Ruben Martinez Buey
- [gmx-users] CRY-ED question
Bert de Groot
- [gmx-users] CRY-ED question
Anton Feenstra
- [gmx-users] CRY-ED question
Daan van Aalten
- [gmx-users] CRY-ED question
Bert de Groot
- [gmx-users] Crystallographic waters for TIP4P
Choon Peng
- [gmx-users] Defaults in lipid.itp - please help!
Semen Esilevsky
- [gmx-users] Defaults in lipid.itp - please help!
Andreas Kukol
- [gmx-users] Defaults in lipid.itp - please help!
Semen Esilevsky
- [gmx-users] Defaults in lipid.itp - please help!
Andreas Kukol
- [gmx-users] Defaults in lipid.itp - please help!
Semen Esilevsky
- [gmx-users] Defaults in lipid.itp - please help!
Semen Esilevsky
- [gmx-users] Defaults in lipid.itp - please help!
Milan Melichercik
- [gmx-users] Defaults in lipid.itp - please help!
Milan Melichercik
- [gmx-users] Defaults in lipid.itp - please help!
Semen Esilevsky
- [gmx-users] Defaults in lipid.itp - please help!
Milan Melichercik
- [gmx-users] Defaults in lipid.itp - please help!
Semen Esilevsky
- [gmx-users] Defaults in lipid.itp - please help!
Milan Melichercik
- [gmx-users] Defaults in lipid.itp - please help!
Berk Hess
- [gmx-users] Defaults in lipid.itp - please help!
Semen Esilevsky
- [gmx-users] Different sets of residues for ensemble fitting and RMSF calculation
Xavier Periole
- [gmx-users] Different sets of residues for ensemble fitting and RMSF calculation
Mark Berjanskii
- [gmx-users] diffusion constant of protein.
Coincon Mathieu
- [gmx-users] Distance computation using g_mindist
David
- [gmx-users] Distance computation using g_mindist
David
- [gmx-users] Distance computation using g_mindist
sunita at chem.iitb.ac.in
- [gmx-users] DNA on GROMACS?
Hwankyu Lee
- [gmx-users] double bonds
Aina Quintilla
- [gmx-users] double bonds
Dallas Warren
- [gmx-users] Duron Benchmark
DV
- [gmx-users] electrostatic potencial on site position
Milton Taidi Sonoda
- [gmx-users] electrostatic potencial on site position
varma1 at uiuc.edu
- [gmx-users] Electrostatic potential of NaCl on DPPC system
Yuhua Song
- [gmx-users] em.mdp
juraina at um.edu.my
- [gmx-users] em.mdp
Nuno R. L. Ferreira
- [gmx-users] em.mdp
Luca Mollica
- [gmx-users] eneconv error
Andre Farias de Moura
- [gmx-users] eneconv error
Andre Farias de Moura
- [gmx-users] eneconv error
Nuno R. L. Ferreira
- [gmx-users] eneconv error
Nuno R. L. Ferreira
- [gmx-users] eneconv error
Rainer Boeckmann
- [gmx-users] eneconv error
Berk Hess
- [gmx-users] eneconv error
Rainer Boeckmann
- [gmx-users] Energy drift problem
xzp02 at mails.tsinghua.edu.cn
- [gmx-users] Energy drift problem
Anton Feenstra
- [gmx-users] Energy drift problem
xzp02 at mails.tsinghua.edu.cn
- [gmx-users] Energy drift problem
Anton Feenstra
- [gmx-users] entropy
parinald at unsl.edu.ar
- [gmx-users] error
Dinesh Pinisetty
- [gmx-users] error
Xavier Periole
- [gmx-users] error
Dinesh Pinisetty
- [gmx-users] error
Xavier Periole
- [gmx-users] error
Dinesh Pinisetty
- [gmx-users] error
Dallas Warren
- [gmx-users] error
Bert de Groot
- [gmx-users] error 1-4 interaction
Maarten Wolf
- [gmx-users] error 1-4 interaction
Anton Feenstra
- [gmx-users] Everything you wanted to know...
Anton Feenstra
- [gmx-users] extend MD runs
deepa rajamani
- [gmx-users] extend MD runs
Xavier Periole
- [gmx-users] Force Fields for IONS
Tandia, Adama
- [gmx-users] Force-Field-Request
acorrea at unisa.it
- [gmx-users] forcefield
Dinesh Pinisetty
- [gmx-users] forcefield
Dinesh Pinisetty
- [gmx-users] freezing atom group speed up issue
Sung-Joo Lee
- [gmx-users] freezing atom group speed up issue
David
- [gmx-users] freezing atoms does not speed up calculation
Sung-Joo Lee
- [gmx-users] Fw: Can you help me ?
Nuno R. L. Ferreira
- [gmx-users] Fw: Can you help me ?
Andrey V Golovin
- [gmx-users] g_cluster: fit & rmsd groups
Nuno R. L. Ferreira
- [gmx-users] g_cluster: fit & rmsd groups
Nuno R. L. Ferreira
- [gmx-users] g_cluster: fit & rmsd groups
David van der Spoel
- [gmx-users] g_rama Fatal error & Ace group (again)
Jake .
- [gmx-users] g_sas, VdW radii
Michael Brunsteiner
- [gmx-users] g_sas, VdW radii
David
- [gmx-users] gen_seed
prasad
- [gmx-users] gen_seed
David
- [gmx-users] Genbox & Topologies
Gary
- [gmx-users] Genbox & Topologies
Dallas Warren
- [gmx-users] genconf
Dinesh Pinisetty
- [gmx-users] genconf
Xavier Periole
- [gmx-users] genconf
Dinesh Pinisetty
- [gmx-users] genconf
Xavier Periole
- [gmx-users] genconf or way to duplicate trajectory?
Yuhua Song
- [gmx-users] geometry is rigid, but angle energy changes
Oleg V. Stroganov
- [gmx-users] getting problem in some of the commonds
Alok
- [gmx-users] Re: gmx-users Digest, Vol 3, Issue 63
anwar at cdfd.org.in
- [gmx-users] gromacs double precision installation
Pankaj Kumar JRF
- [gmx-users] gromacs double precision installation
Paul van Maaren
- [gmx-users] gromacs double precision installation
Choon Peng
- [gmx-users] grompp problem with cpp -- 'does not match topology'
yli at hcg.bmb.uga.edu
- [gmx-users] Grompp problem?
Amy Petrik
- [gmx-users] Grompp problem?
David
- [gmx-users] Grompp problem?
Kay Gottschalk
- [gmx-users] Grompp problem?
Amy Petrik
- [gmx-users] Grompp problem?
David van der Spoel
- [gmx-users] Hbonds
Raghunadha Reddy Burri
- [gmx-users] Hbonds
David van der Spoel
- [gmx-users] Help ! Some molecules go away from my bilayer.....
sgaray at fbcb.unl.edu.ar
- [gmx-users] Help ! Some molecules go away from my bilayer.....
David
- [gmx-users] Re: Help ! Some molecules go away from my bilayer..... (stearic acid data)
Sergio Garay
- [gmx-users] Help!: Some molecules go away from my bilayer.......
Sergio Garay
- [gmx-users] Help!: Some molecules go away from my bilayer.......
Sergio Garay
- [gmx-users] Help!: Some molecules go away from my bilayer.......
Sergio Garay
- [gmx-users] how can I set the value of bd-fric
Hanming
- [gmx-users] how can I set the value of bd-fric
Berk Hess
- [gmx-users] How I can create a gromacs input file from a gamess output
Marcelo de Freitas Lima
- [gmx-users] How I can create a gromacs input file from a gamess output
Dallas Warren
- [gmx-users] Re:How I can create a gromacs input file from a gamess output
Arlan Gonçalves
- [gmx-users] Re: How I can create a gromacs input file from a gamess output
Ing. Vojtech Spiwok
- [gmx-users] How I can create a gromacs input file from a gamess output (one more question)
Christopher Tran
- [gmx-users] Re: How I can create a gromacs input file from a gamess output (one more question)
Ing. Vojtech Spiwok
- [gmx-users] How I can create a gromacs input file from a gamess output (one more question)
Marcelo de Freitas Lima
- [gmx-users] how to calculate water residence time?
Linda
- [gmx-users] how to calculate water residence time?
Anton Feenstra
- [gmx-users] how to continue simulation?
Rui Qiao
- [gmx-users] how to continue simulation?
Dallas Warren
- [gmx-users] how to continue simulation?
Kay Gottschalk
- [gmx-users] how to continue simulation?
David
- [gmx-users] how to continue simulation?
Erik Lindahl
- [gmx-users] how to continue simulation?
Berk Hess
- [gmx-users] how to do force analysis using trajectory file?
Rui Qiao
- [gmx-users] how to do force analysis using trajectory file?
David van der Spoel
- [gmx-users] Re: how to do force analysis using trajectory file?
Pim Schravendijk
- [gmx-users] Re: how to do force analysis using trajectory file?
Pim Schravendijk
- [gmx-users] how to do force analysis using trajectory file?
Berk Hess
- [gmx-users] How to get one T coupling for a multi component systems ?
Anton Feenstra
- [gmx-users] How to get one T coupling for a multi component systems ?
Tandia, Adama
- [gmx-users] Implicit solvent model
Arpita Mitra
- [gmx-users] IMPLICIT SOLVENT-help
acorrea at unisa.it
- [gmx-users] Is it possible to fix one cell length in pressure-coupling
Anton Feenstra
- [gmx-users] Is it possible to fix one cell length in pressure-coupling
xzp02 at mails.tsinghua.edu.cn
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
p.keymer at student.qut.edu.au
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
david.evans at ulsop.ac.uk
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
Michel Cuendet
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
Berk Hess
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
david.evans at ulsop.ac.uk
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
Berk Hess
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
david.evans at ulsop.ac.uk
- [gmx-users] Is the AMBER or CHARMM Force field running in GROMACS
Berk Hess
- [gmx-users] lam-mpi question
aneamtu at iasi.mednet.ro
- [gmx-users] lam-mpi question
Oliver Beckstein
- [gmx-users] ligand drifting
Nuno R. L. Ferreira
- [gmx-users] ligand drifting
A. A. Jeyaprakash
- [gmx-users] ligand drifting
David
- [gmx-users] Linux binaries
Amy Petrik
- [gmx-users] Linux binaries
David
- [gmx-users] Long range dispersion correction
david.evans at ulsop.ac.uk
- [gmx-users] Long range dispersion correction
David
- [gmx-users] Long range dispersion correction
Yiannis
- [gmx-users] Long range dispersion correction
David van der Spoel
- [gmx-users] Long range dispersion correction
david.evans at ulsop.ac.uk
- [gmx-users] Long range dispersion correction
david.evans at ulsop.ac.uk
- [gmx-users] Long range dispersion correction
David van der Spoel
- [gmx-users] Long range dispersion correction
david.evans at ulsop.ac.uk
- [gmx-users] Long range energy
nicolas Dinter
- [gmx-users] Long range energy
Berk Hess
- [gmx-users] Long range energy
nicolas Dinter
- [gmx-users] Long range energy
Berk Hess
- [gmx-users] long range interactions depend on bonds ?
Michael Brunsteiner
- [gmx-users] long range interactions depend on bonds ?
Berk Hess
- [gmx-users] mdrun stopped undeservedly
yinjun
- [gmx-users] mdrun stopped undeservedly
David
- [gmx-users] mean life time
parinald at unsl.edu.ar
- [gmx-users] mean life time
David
- [gmx-users] Membrane issues
Haerterich, Steffen
- [gmx-users] Membrane issues
Semen Esilevsky
- [gmx-users] membrane mimetics
John Simms
- [gmx-users] methanol parameters
Gunnar Schroeder
- [gmx-users] mixed solvent density
John Simms
- [gmx-users] molecular dynamics problems
vlad.chindea at pharmatech.ro
- [gmx-users] molecular dynamics problems
Xavier Periole
- [gmx-users] molecular dynamics problems
Xavier Periole
- [gmx-users] molecular dynamics problems
vlad.chindea at pharmatech.ro
- [gmx-users] molecular dynamics problems
Anton Feenstra
- [gmx-users] molecular dynamics problems
vlad.chindea at pharmatech.ro
- [gmx-users] mpiexec..
Sekwan Oh
- [gmx-users] multiple backups
Berk Hess
- [gmx-users] multiple backups
Nguyen Hoang Phuong
- [gmx-users] multiple backups
Bert de Groot
- [gmx-users] multiple backups
Andrey V Golovin
- [gmx-users] multiple backups
Anton Feenstra
- [gmx-users] multiple backups
Nguyen Hoang Phuong
- [gmx-users] multiple backups
Berk Hess
- [gmx-users] multiple backups
Anton Feenstra
- [gmx-users] neutral LYS (NH2)
mauricio arenas
- [gmx-users] neutral LYS (NH2)
Haberl
- [gmx-users] neutral LYS (NH2)
Haberl
- [gmx-users] neutral LYS (NH2)
Oliver Beckstein
- [gmx-users] neutral LYS (NH2)
mauricio arenas
- [gmx-users] ngmx 'command not found'
Marc Daley
- [gmx-users] ngmx 'command not found'
Anton Feenstra
- [gmx-users] ngmx 'command not found'
Marc Daley
- [gmx-users] ngmx 'command not found'
Anton Feenstra
- [gmx-users] ngmx 'command not found'
Marc Vogt
- [gmx-users] NM and energy minimization
John Simms
- [gmx-users] NM and energy minimization
Bert de Groot
- [gmx-users] Re: nonbonded parameter
Alessandra Villa
- [gmx-users] nonbonded parameters
Carlos Emidio
- [gmx-users] Number of atoms limitation
Tandia, Adama
- [gmx-users] RE: Number of atoms limitation
Tandia, Adama
- [gmx-users] number of frames in trajectory
Berk Hess
- [gmx-users] number of frames in trajectory
Erik Lindahl
- [gmx-users] NVE discussion again
Linda
- [gmx-users] On isotropic pressure coupling
xzp02 at mails.tsinghua.edu.cn
- [gmx-users] OPLS lipids?
Jee E Rim
- [gmx-users] order parameter
Carl-Johan Högberg
- [gmx-users] order parameter
Carl-Johan Högberg
- [gmx-users] Output of mpi gromacs
Tandia, Adama
- [gmx-users] Output of mpi gromacs
Xavier Periole
- [gmx-users] Output of mpi gromacs
Nguyen Hoang Phuong
- [gmx-users] Output of mpi gromacs
Berk Hess
- [gmx-users] output unimaged trajectory?
david.evans at ulsop.ac.uk
- [gmx-users] output unimaged trajectory?
Nuno R. L. Ferreira
- [gmx-users] output unimaged trajectory?
david.evans at ulsop.ac.uk
- [gmx-users] output unimaged trajectory?
Nuno R. L. Ferreira
- [gmx-users] output unimaged trajectory?
David van der Spoel
- [gmx-users] output unimaged trajectory?
david.evans at ulsop.ac.uk
- [gmx-users] output unimaged trajectory?
Berk Hess
- [gmx-users] output unimaged trajectory?
david.evans at ulsop.ac.uk
- [gmx-users] output unimaged trajectory?
Berk Hess
- [gmx-users] output unimaged trajectory?
Nuno R. L. Ferreira
- [gmx-users] parallel computations
fabio affinito
- [gmx-users] parallel computations
David van der Spoel
- [gmx-users] parallel computations
fabio affinito
- [gmx-users] parallel computations
Berk Hess
- [gmx-users] Re: Parallel run on Gromacs ...
Tandia, Adama
- [gmx-users] Re: Parallel run on Gromacs ...
Andrea Carotti
- [gmx-users] pbc
Bruno Pagano
- [gmx-users] pbc
David
- [gmx-users] PBC problem
Andrea Carotti
- [gmx-users] PBC problem
Xavier Periole
- [gmx-users] PBC problem
Andrea Carotti
- [gmx-users] PBC problem
Xavier Periole
- [gmx-users] PBC problem
Andrea Carotti
- [gmx-users] PBC problem
David van der Spoel
- [gmx-users] PBC problem
Andrea Carotti
- [gmx-users] PBC problem
Berk Hess
- [gmx-users] PBC problem
Andrea Carotti
- [gmx-users] pdb
Dinesh Pinisetty
- [gmx-users] pdb
David
- [gmx-users] pdb
Xavier Periole
- [gmx-users] pdb2gmx -ter
Raghunadha Reddy Burri
- [gmx-users] pdb2gmx -ter
Rainer Boeckmann
- [gmx-users] pdb2gmx -ter
Milan Melichercik
- [gmx-users] PDB2GMX Not Using .itp File
Gromacs Newbie
- [gmx-users] pdb2gmx omit residue
Gary
- [gmx-users] pdb2gmx omit residue
Dinesh Pinisetty
- [gmx-users] pdb2gmx omit residue
Derrick Guang Yuh Lee
- [gmx-users] pdb2gmx Problems
Gromacs Newbie
- [gmx-users] pdb2gmx Problems
David
- [gmx-users] pdb2gmx Problems
Gromacs Newbie
- [gmx-users] pdb2gmx Problems
David
- [gmx-users] pdb2gmx Problems
Gary
- [gmx-users] pdb2gmx Problems
David
- [gmx-users] pdb2gmx Problems
Gary
- [gmx-users] pdb2gmx Problems
Dallas Warren
- [gmx-users] phosphorylated Asp
Kay Gottschalk
- [gmx-users] Possible problem in trxio.c
Pierfrancesco Zuccato
- [gmx-users] Possible problem in trxio.c
Pierfrancesco Zuccato
- [gmx-users] Possible problem in trxio.c
David van der Spoel
- [gmx-users] Possible problem in trxio.c
Erik Lindahl
- [gmx-users] Possible problem in trxio.c
Pierfrancesco Zuccato
- [gmx-users] postdoctorals
Arturas
- [gmx-users] postdoctorals
Mark Berjanskii
- [gmx-users] Potential energy of the prot. only
pascal.baillod at epfl.ch
- [gmx-users] Potential energy of the prot. only
Anton Feenstra
- [gmx-users] Pressure Calculation
Farshid Mostowfi
- [gmx-users] Pressure Calculation
David
- [gmx-users] Pressure Calculation
Farshid Mostowfi
- [gmx-users] Pressure Calculation
David
- [gmx-users] pressure coupling problem
raj vel
- [gmx-users] pressure coupling problem
David van der Spoel
- [gmx-users] Problem in Invaccum MD
anwar at cdfd.org.in
- [gmx-users] Problem in Invaccum MD
Dallas Warren
- [gmx-users] Problem in Invaccum MD
David van der Spoel
- [gmx-users] problem in protein - cofactor linkage
pankaj at cdfd.org.in
- [gmx-users] problem in protein - cofactor linkage
Anton Feenstra
- [gmx-users] problem in simulation with PLP cofactor
pankaj at cdfd.org.in
- [gmx-users] problem with -multi
Nguyen Hoang Phuong
- [gmx-users] problem with -multi
Anton Feenstra
- [gmx-users] problem with -multi
Berk Hess
- [gmx-users] problem with -multi
Nguyen Hoang Phuong
- [gmx-users] problem with -multi
Anton Feenstra
- [gmx-users] Problem with CG in double precision
anwar at cdfd.org.in
- [gmx-users] Problem with CG in double precision
Anton Feenstra
- [gmx-users] problem with MD and docking
Maximiliano Figueroa Y
- [gmx-users] PRODRG vs PDB2GMX output generated
Gary
- [gmx-users] PRODRG vs PDB2GMX output generated
David
- [gmx-users] PRODRG2 output-why only polar hydrogens?
Nuno R. L. Ferreira
- [gmx-users] PRODRG2 output-why only polar hydrogens?
A. A. Jeyaprakash
- [gmx-users] Protein jumping out of box
herbst at fhi-berlin.mpg.de
- [gmx-users] Protein jumping out of box
Nuno R. L. Ferreira
- [gmx-users] Protein jumping out of box
Nuno R. L. Ferreira
- [gmx-users] protein-lipid order
John Simms
- [gmx-users] protein-lipid order
Xavier Periole
- [gmx-users] Protonation states for TYR,CYS,ARG
Kamil Tamiola
- [gmx-users] Protonation states for TYR,CYS,ARG
David
- [gmx-users] PS. freeze group speed up
Sung-Joo Lee
- [gmx-users] pull code
Kay Gottschalk
- [gmx-users] pull code
Berk Hess
- [gmx-users] QM/MM code?
Sishi Tang
- [gmx-users] QM/MM code?
Gerrit Groenhof
- [gmx-users] QM/MM code?
Ran Friedman
- [gmx-users] question about g_rdf
Yuhua Song
- [gmx-users] question about g_sas
neda mirsamadi
- [gmx-users] question about g_sas
Dallas Warren
- [gmx-users] Re Re: Error 1-4 interaction
Maarten Wolf
- [gmx-users] reducing vdw radii
Uwe Richter
- [gmx-users] reducing vdw radii
David van der Spoel
- [gmx-users] Re: reducing vdw radii
Kia Balali-Mood
- [gmx-users] Re: reducing vdw radii
David van der Spoel
- [gmx-users] ref_t in .mdp
yinjun
- [gmx-users] residue
Dinesh Pinisetty
- [gmx-users] residue database
Dinesh Pinisetty
- [gmx-users] residue database
David
- [gmx-users] residue database
Dinesh Pinisetty
- [gmx-users] residue database
Xavier Periole
- [gmx-users] rhombic dodecahedron - box vectors
Nuno R. L. Ferreira
- [gmx-users] rhombic dodecahedron - box vectors
Anton Feenstra
- [gmx-users] Running GROMACS with DNA
p.keymer at student.qut.edu.au
- [gmx-users] Running GROMACS with DNA
Andrey V Golovin
- [gmx-users] Sample Molecules Containing Silicon
Gromacs Newbie
- [gmx-users] Sample Molecules Containing Silicon
David
- [gmx-users] Sample Molecules Containing Silicon
Gromacs Newbie
- [gmx-users] segmentation error
コウ チ
- [gmx-users] segmentation error
コウ チ
- [gmx-users] selecting part of a trajectory
Bamidele Adisa
- [gmx-users] selecting part of a trajectory
Xavier Periole
- [gmx-users] set maximum CPU running time
F Jiang
- [gmx-users] simulated annealing
Sekar Ramachandran
- [gmx-users] simulating in double precision but writing in singleprecision
Berk Hess
- [gmx-users] simulating in double precision but writing in single precision
Milton Taidi Sonoda
- [gmx-users] Simulation Box
Hadas Lapid
- [gmx-users] Simulation Box
Tsjerk Wassenaar
- [gmx-users] simulation failure
herbst at fhi-berlin.mpg.de
- [gmx-users] simulation failure
David van der Spoel
- [gmx-users] simulation failure
herbst at fhi-berlin.mpg.de
- [gmx-users] simulation failure
herbst at fhi-berlin.mpg.de
- [gmx-users] simulation failure
Erik Lindahl
- [gmx-users] simulation with cofactor
pankaj at cdfd.org.in
- [gmx-users] simulation with cofactor
Semen Esilevsky
- [gmx-users] size of the molecule
raj vel
- [gmx-users] Re: size of the molecule
Ing. Vojtech Spiwok
- [gmx-users] Solvation causes failure of GROMPP preprocessing for Conjugate Gradients minimization?
David
- [gmx-users] Solvation causes failure of GROMPP preprocessing for Conjugate Gradients minimization?
Mark Berjanskii
- [gmx-users] Solvation causes failure of GROMPP preprocessing for Conjugate Gradients minimization?
Mark Berjanskii
- [gmx-users] Solvation causes failure of GROMPP preprocessing for Conjugate Gradients minimization?
Mark Berjanskii
- [gmx-users] spc water questions
コウ チ
- [gmx-users] spc water questions
David van der Spoel
- [gmx-users] SS bridges
Dmitry Kovalsky
- [gmx-users] SS bridges
David
- [gmx-users] SS bridges
Xavier Periole
- [gmx-users] SS bridges
Dmitry Kovalsky
- [gmx-users] strict-aliasing warning
Michel Cuendet
- [gmx-users] Stuck at Invaccum MD
anwar at cdfd.org.in
- [gmx-users] SUSPICIOUS: Pressure scaling ...
Tandia, Adama
- [gmx-users] SUSPICIOUS: Pressure scaling ...
Anton Feenstra
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Li Dawei
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Anton Feenstra
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Li Dawei
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Anton Feenstra
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Li Dawei
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Li Dawei
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Anton Feenstra
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Li Dawei
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Anton Feenstra
- [gmx-users] The meaning of rlist, rvdm and rcolumn
Berk Hess
- [gmx-users] Timers used in Gromacs and accuracy?
Anton Feenstra
- [gmx-users] Timers used in Gromacs and accuracy?
Fiona Reid
- [gmx-users] topology problems
Marc Bruning
- [gmx-users] topology problems
Anton Feenstra
- [gmx-users] topology problems
Marc Bruning
- [gmx-users] trjconv
Kay Gottschalk
- [gmx-users] trjconv
Peter Zoon
- [gmx-users] trjconv
David van der Spoel
- [gmx-users] trjconv
david.evans at ulsop.ac.uk
- [gmx-users] trjconv
Kay Gottschalk
- [gmx-users] trjconv
Kay Gottschalk
- [gmx-users] troubles with zinc ion and distance restraint
elena.papaleo at unimib.it
- [gmx-users] unsymmetric profile for electrostatic potential with g_potential
Yuhua Song
- [gmx-users] virial and external potential
Vincent Ballenegger
- [gmx-users] virial and external potential
Berk Hess
- [gmx-users] viscosity
parinald at unsl.edu.ar
- [gmx-users] viscosity
David
- [gmx-users] Water molecule can't be settled
Tanos
- [gmx-users] Water molecule can't be settled
Christopher Tran
- [gmx-users] What is the meaning of the sentence in my md.log file?
Hanming
- [gmx-users] What is the meaning of the sentence in my md.log file?
Berk Hess
- [gmx-users] when grompp and mdrun disagree about processor numbers
fabio affinito
- [gmx-users] when grompp and mdrun disagree about processor numbers
David van der Spoel
- [gmx-users] whole/center/inbox
Bruno Pagano
- [gmx-users] whole/center/inbox
Yiannis
- [gmx-users] Why the carbons in the benzene can not keep in theplane when i d
Berk Hess
- [gmx-users] Why the carbons in the benzene can not keep in the plane when i do the bd?
Hanming
Last message date:
Sat Jul 31 11:15:44 CEST 2004
Archived on: Thu Nov 14 12:00:56 CET 2013
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