[gmx-users] genconf

Dinesh Pinisetty dpinis1 at lsu.edu
Thu Jul 15 21:57:26 CEST 2004





Respected Dr.Xavier,
            I think it was genbox not genbos.Anyway by the solution you
have given the box size can be increased but i need to multiply molecules
with atoms.If suppose I have 14 atoms in one molecule numbering from 1-14,I
need to mutiply it to 8-9 molecules with atoms numbering increasing
continuosly.i.e atoms should go to a number 9*14.
I appreciate your help,Thanks in advance......


Dinesh Pinisetty wrote:

>
>
>Hello,
>        Can anyone please tell me how to multiply number of molecules
using
>genconf..
>I have one molecule with 14 atoms now if I want to multiply it to 10-20
>molecules with atom numbers iin increasing oeder how to use genconf.......
>I appreciate your help ...
>Thanks in advance.....
>
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>
genbos -box X Y Z  multiplises your box X times on the x direction,
Y times on th ey direction etc ...

XAvier

--
----------------------------------------------

Xavier Periole - Ph.D.

Dept. of Biophysical Chemistry / MD Group
Univ. of Groningen
Nijenborgh 4
9747 AG Groningen
The Netherlands

Tel: +31-503634329
Fax: +31-503634800
email: x.periole at chem.rug.nl
web-page: http://md.chem.rug.nl/~periole

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