[gmx-users] eneconv error
Berk Hess
gmx3 at hotmail.com
Thu Jul 29 13:19:07 CEST 2004
>From: Rainer Boeckmann <rainer at bioc.unizh.ch>
>Reply-To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>To: Discussion list for GROMACS users
><gmx-users at gromacs.org>,andre at qt.dq.ufscar.br
>Subject: [gmx-users] eneconv error
>Date: Thu, 29 Jul 2004 12:51:31 +0200
>
>Hi,
>
>has there been any solution to the problem Andre reported some days ago:
>
>eneconv -f out*.edr
>Reading frame 0 time 10.000 Segmentation Error
>
>I faced the same error message with version 3.2.1. (at least for parts of a
>simulation). g_energy and gmxcheck of the respective edr-files work fine.
I looked in the cvs and it turns out that David van der Spoel
has fixed a problem in eneconv when the first file did not
start at time 0 in May.
A diff of the eneconv.c source gives:
484c484
< if(begin>0)
---
> /* if(begin>0) */
486c486
< else
---
> /* else
488c488
<
---
> */
532c532
< if (startee != NULL)
---
> if /*(startee != NULL)*/ (begin > 0)
I guess you can fix the code from this diff.
If not, I can mail you the fixed eneconv.c.
Berk.
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