[gmx-users] PDB2GMX: No Silicon Atoms Found

David spoel at xray.bmc.uu.se
Mon Jun 21 23:43:29 CEST 2004


On Mon, 2004-06-21 at 23:22, Gromacs Newbie wrote:
> Hi GMX-USERS,
> 
> When I try to convert a PDB file containing silicon
> molecules, PDB2GMX can not find those atoms.  How do I
> enable support for Silicon atoms in Gromacs.  Thank
> You.
write your own topology. chapter 5 in the manual.
> 
> -Gary
> 
> 
> 		
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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