[gmx-users] my_dssp or your_dssp?

Dr Seth Carlton OLSEN s.olsen1 at uq.edu.au
Wed Jun 23 09:09:47 CEST 2004

Dear Gromacs Users,

I am running through the tutorials in order to familiarize myself with GROMACS and have come across an instance (in the 'speptide' example) where it is recommended to use a program (my_dssp) that does not appear to be included in the GROMACS distribution.  Where can I obtain this program?  I have attempted to use the do_dssp program as well, but I have come across the 'dssp executable does not exist error' mentioned elsewhere in this mailing list.  Is the program free to download and if so, where can I get it.  Thanks.



Dr Seth Olsen, PhD
Postdoctoral Fellow, Computational Systems Biolgy Group
Centre for Computational Molecular Science
Chemistry Building,
The University of Queensland
Qld 4072, Brisbane, Australia

tel (617) 33653732
fax (617) 33654623
email: s.olsen1 at uq.edu.au
Web: www.ccms.uq.edu.au 



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