[gmx-users] g_cluster fatal error

Nuno R. L. Ferreira nunolf at ci.uc.pt
Tue Jun 29 20:46:05 CEST 2004

On Tuesday 29 June 2004 03:30 pm, Berk Hess wrote:
> >Found 1 clusters
> >
> >Writing rms distance/clustering matrix Fatal error: Can not plot more than
> >16
> >discrete colors
> >
> >
> >Can someone explain what is going on?
> I can try to explain, but I don't think you want to know.
> There are multiple problems in the code that can cause this error.
> I guess somebody has tuned the code for his own needs
> such that it does not work any more for other users.
> I have written twice about the same bug, but I guess the person
> is on holiday.
> For now you can play with the -minstruct option, which to avoid crashes
> should be larger than one and large enough so you do not get more
> than 16 clusters with minstruct or more structures in it.
> Start with 2.

Hi Berk

With -minstruct eq. 2, the problem is gone.


> Berk.
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Nuno Ricardo Santos Loureiro da Silva Ferreira
Grupo de Química Biológica 
Departamento Química
Universidade de Coimbra
"Do not worry about your difficulties in maths.
 I can assure you that mine are still greater."

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