[gmx-users] g_cluster fatal error

[Nuno R. L. Ferreira]

On Tuesday 29 June 2004 04:12 pm, David van der Spoel wrote:
> On Tue, 2004-06-29 at 16:30, Berk Hess wrote:
> > >Found 1 clusters
> > >
> > >Writing rms distance/clustering matrix Fatal error: Can not plot more
> > > than 16
> > >discrete colors
> > >
> > >
> > >Can someone explain what is going on?
>
> can you try recompiling the g_cluster tool in gmx/src/tools
> after replacing (line 1411):
> 		    &ncluster,TRUE,rlo_bot,rhi_bot);
> by
> 		    &ncluster,FALSE,rlo_bot,rhi_bot);
>
> ?

Here's the result.
I've edited gmx_cluster.c as you proposed and incorporated Roman's advice.

source='gmx_cluster.c' object='gmx_cluster.lo' libtool=yes \
depfile='.deps/gmx_cluster.Plo' tmpdepfile='.deps/gmx_cluster.TPlo' \
depmode=none /bin/sh ../../config/depcomp \
/bin/sh ../../libtool --mode=compile mpicc -DHAVE_CONFIG_H -I. -I. -I../../src 
-I/usr/X11R6/include  -I../../include -DGMXLI
BDIR=\"/home/biomd/bin/gmx321/share/top\" -I/home/biomd/libs/fftw213/include   
-O3  -c -o gmx_cluster.lo `test -f 'gmx_clust
er.c' || echo './'`gmx_cluster.c
mpicc -DHAVE_CONFIG_H -I. -I. -I../../src -I/usr/X11R6/include -I../../include 
-DGMXLIBDIR=\"/home/biomd/bin/gmx321/share/to
p\" -I/home/biomd/libs/fftw213/include -O3 -c gmx_cluster.c -o gmx_cluster.o
gmx_cluster.c: In function `analyze_clusters':
gmx_cluster.c:847: parse error before character 0240
make[3]: *** [gmx_cluster.lo] Error 1


-- 
**********************************************
Nuno Ricardo Santos Loureiro da Silva Ferreira
Grupo de Química Biológica 
Departamento Química
Universidade de Coimbra
Portugal
www.biolchem.qui.uc.pt
**********************************************
"Do not worry about your difficulties in maths.
 I can assure you that mine are still greater."
                                   emc2