[gmx-users] Gold layers

[Keta Jones]

Dear Peter Zoon,

Many many thanks for a quick response.Actually I am
totally new to this area. I do not have any experience
in this regard.Still I have to all these as part of my
project.Would you please suggest any user friendly
package for this..so that I can go through the manual
and try to solve my proble.Is there any tutorial
available for this type of stuffs?

Thanks again regards,
keta





--- Peter Zoon <zoon at science.uva.nl> wrote:
> The best thing to do if you have to create the gold
> cooridinates 
> yourself. Is to use a graphical interface (almost
> any molecular 
> mechanics program youchose would be suitable for
> this) in which you 
> can make the gold and than export it as pdb.
> 
> cheers
> Peter
> >Dear gromacs users,
> >
> >Please help me for this proble.
> >
> >I want to study a protein in between wo layers of
> gold
> >molecules.But i do not know how to make gold layes
> in
> >Gromacs.Is there any co-ordinate file available for
> >the Gold to serve  this purpose ? If not please
> help
> >me how to make this.I have the pdb file for my
> >protein.but I have to createthe gold co-ordinates.
> >
> >I will appreciate if some can spend sometime to
> help
> >me.
> >
> >regards,
> >keta
> >
> >=====
> >Keta
>
>**************************************************************************************
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=====
Keta
**************************************************************************************

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