March 2004 Archives by thread

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Starting: Mon Mar 1 01:17:01 CET 2004
Ending: Wed Mar 31 20:23:01 CEST 2004
Messages: 481

• [gmx-users] g_cluster   ltchong at stanford.edu
• [gmx-users] [PATCH] broken configuration of all-static   Donnie Berkholz
  • [gmx-users] [PATCH] broken configuration of all-static   Erik Lindahl
• [gmx-users] [Help!] A mystery in x2top!   Yinghong
  • [gmx-users] [Help!] A mystery in x2top!   David van der Spoel
• [gmx-users] from beginners: how to center?   Mr.wolf_79
  • [gmx-users] from beginners: how to center?   Tsjerk Wassenaar
• [gmx-users] small charge with PME   Itamar Kass
  • [gmx-users] small charge with PME   Dallas Warren
    • [gmx-users] small charge with PME   Itamar Kass
• [gmx-users] config of gromacs on windows pc   John Kerrigan
  • [gmx-users] gromacs ff   Kay Gottschalk
• [gmx-users] surface normal direction of a membrane potential   Markus O Kaukonen
  • [gmx-users] surface normal direction of a membrane potential   David van der Spoel
• [gmx-users] Charge calcn   Anton Feenstra
• [gmx-users] Patch for AMD Athlon   TAPO (Thomas Agersten Poulsen)
  • [gmx-users] Patch for AMD Athlon   Marc Lensink
  • [gmx-users] Patch for AMD Athlon   Erik Lindahl
    • [gmx-users] GROMACS on a parallel Linux cluster   Peter Spijker
      • [gmx-users] GROMACS on a parallel Linux cluster   Ilya Chorny
      • [gmx-users] GROMACS on a parallel Linux cluster   Peter Spijker
      • [gmx-users] GROMACS on a parallel Linux cluster   Erik Lindahl
      • [gmx-users] question of {$gmxdir}/share/top/specbond.dat   Zhen Qin
• [gmx-users] A question on using g_density for electron densities.   Hwankyu Lee
  • [gmx-users] A question on using g_density for electron densities.   Zhen Qin
    • [gmx-users] A question on using g_density for electron densities.   Hwankyu Lee
      • [gmx-users] A question on using g_density for electron densities.   Zhen Qin
      • [gmx-users] A question on using g_density for electron densities.   Hwankyu Lee
      • [gmx-users] A question on using g_density for electron densities.   Hwankyu Lee
      • [gmx-users] A question on using g_density for electron densities.   David van der Spoel
• [gmx-users] g_rdf gives odd results that don't add up?   Ben Roberts
• [gmx-users] (no subject)   F JH
• [gmx-users] Test suite failures   Ross Nobes
  • [gmx-users] Test suite failures   David van der Spoel
• [gmx-users] leukotriene FF parameters   Raghu Prasad Rao, Metpally
• [gmx-users] Compilation problems for 3.2.1   Ross Nobes
  • [gmx-users] Compilation problems for 3.2.1   Erik Lindahl
• [gmx-users] About g_rmsf and glycine   Alan Wilter Sousa da Silva
• [gmx-users] About g_rmsf and glycine   Alan Wilter Sousa da Silva
• [gmx-users] Compilation problems for 3.2.1   Ross Nobes
  • [gmx-users] renicing / setting priorities under windows   Michael Brunsteiner
    • [gmx-users] renicing / setting priorities under windows   Christian Burisch
      • [gmx-users] renicing / setting priorities under windows   Erik Lindahl
      • [gmx-users] renicing / setting priorities under windows   Peter Zoon
    • [gmx-users] renicing / setting priorities under windows   Peter Zoon
• [gmx-users] Residue problem in DNA   Anton Feenstra
• [gmx-users] Test suite failures   Ross Nobes
• [gmx-users] running demo with gmx 3.2   Valentin Gogonea
• [gmx-users] fatal error: xtc error   Madhuri Agashe
  • [gmx-users] fatal error: xtc error   Marcos Villarreal
    • [gmx-users] fatal error: xtc error   Madhuri Agashe
• [gmx-users] units in g_sas   Madhuri Agashe
  • [gmx-users] template.c   Ilya Chorny
    • [gmx-users] template.c   Ilya Chorny
      • [gmx-users] template.c   Erik Lindahl
  • [gmx-users] units in g_sas   Dallas Warren
    • [gmx-users] units in g_sas   Madhuri Agashe
      • [gmx-users] units in g_sas   Dallas Warren
      • [gmx-users] units in g_sas   Madhuri Agashe
      • [gmx-users] units in g_sas   Dallas Warren
    • [gmx-users] units in g_sas   Madhuri Agashe
• [gmx-users] adding ions with genbox   Tyler Luchko
  • [gmx-users] adding ions with genbox   David van der Spoel
• [gmx-users] Help!! Large VCM(group rest):   Linda
  • [gmx-users] Help!! Large VCM(group rest):   David van der Spoel
  • [gmx-users] Help!! Large VCM(group rest):   Tsjerk Wassenaar
• [gmx-users] Re: Help!! Large VCM(group rest): (David van der Spoel)   Linda
• [gmx-users] compiling gromacs-3.2.1   F Jiang
• [gmx-users] compiling gromacs-3.2.1   Dallas Warren
• [gmx-users] To overwrite the earilier version~   F JH
  • [gmx-users] Bug in g_sgangle 3.2.1 ?   Oliver Lange
• [gmx-users] frozen group in pressure coupling   qiao rui
  • [gmx-users] frozen group in pressure coupling   David van der Spoel
• [gmx-users] problems installing gromacs on itanium2 with HP-UX with double precision   Fernando Cerviño
• [gmx-users] problem with downloaded lipid bilayer   Carl-Johan Högberg
  • [gmx-users] problem with downloaded lipid bilayer   David van der Spoel
    • [gmx-users] problem with downloaded lipid bilayer   Carl-Johan Högberg
• [gmx-users] Cobalt in Gromacs   Anthony Ivetac
  • [gmx-users] Cobalt in Gromacs   Alexandre Suman de Araujo
    • [gmx-users] Cobalt in Gromacs   Anthony Ivetac
      • [gmx-users] Cobalt in Gromacs   Alexandre Suman de Araujo
• [gmx-users] RE:problem with downloaded lipid bilayer   John Simms
  • [gmx-users] RE:problem with downloaded lipid bilayer   Carl-Johan Högberg
    • [gmx-users] RE:problem with downloaded lipid bilayer   Tsjerk Wassenaar
      • [gmx-users] RE:problem with downloaded lipid bilayer   Carl-Johan Högberg
      • [gmx-users] RE:problem with downloaded lipid bilayer   Dallas Warren
• [gmx-users] Re: Cobalt in Gromacs   Ing. Vojtěch Spiwok
• [gmx-users] re:surface normal direction   Markus O Kaukonen
• [gmx-users] re:surface normal direction   Berk Hess
• [gmx-users] dihedral restraints   Lakshmi Padmavathi
• [gmx-users] mdrun, Segmentation Error   Farshid Mostowfi
  • [gmx-users] Implicit Solvent   Ilya Chorny
    • [gmx-users] Implicit Solvent   Erik Lindahl
      • [gmx-users] Alchemical Tranfermation   Ilya Chorny
• [gmx-users] Changing Dielectric constant   Gaurav Porwal
  • [gmx-users] Changing Dielectric constant   Marc Baaden
    • [gmx-users] Changing Dielectric constant   Erik Lindahl
• [gmx-users] Changing Dielectric constant   Andreas Kukol
• [gmx-users] carbohydrate parameters   barrett
  • [gmx-users] carbohydrate parameters   hugo verli
• [gmx-users] stability of the simulation   Dmitry Kovalsky
  • [gmx-users] stability of the simulation   Ilya Chorny
    • [gmx-users] switch   Ilya Chorny
      • [gmx-users] switch   Ilya Chorny
  • [gmx-users] stability of the simulation   Erik Lindahl
• [gmx-users] ffgmx.n2t format   Dr. Ramón Garduño-Juárez
• [gmx-users] Re: Re: rerun of trajectory how to deal with the huge .trr file?   wang chuanming
  • [gmx-users] Re: Re: rerun of trajectory how to deal with the huge .trr file?   Dallas Warren
    • [gmx-users] Re: Re: rerun of trajectory how to deal with the huge .trr file?   Nuno R. L. Ferreira
• [gmx-users] Re: Re: rerun of trajectory how to deal with the huge .trr file?   wang chuanming
• [gmx-users] editconf and genbox   Li Xiaoyi
  • [gmx-users] editconf and genbox   Mario Orsi
• [gmx-users] Re: gmx-users digest, Vol 1 #1313 - 14 msgs   Dmitry Kovalsky
  • [gmx-users] Re: gmx-users digest, Vol 1 #1313 - 14 msgs   Ilya Chorny
• [gmx-users] visualization of eigenvectors   Dmitry Kovalsky
  • [gmx-users] visualization of eigenvectors   Bert de Groot
• [gmx-users] editconf and genbox   Shuaib Shahid
• [gmx-users] editconf and genbox   Shuaib Shahid
• [gmx-users] bug in mdrun::::anomaly in final structure   Shuaib Shahid
• [gmx-users] Segmentation fault!!]   Eric Jakobsson
• [gmx-users] umbrella sampling questions   Marc Baaden
  • [gmx-users] pulling more groups   Robert Vacha
    • [gmx-users] pulling more groups   Mario Orsi
• [gmx-users] changes & bugfixes   Pim Schravendijk
• [gmx-users] fnbd.c - compile errors for gromacs 3.2 and 3.2.1   Thomas Veith
  • [gmx-users] fnbd.c - compile errors for gromacs 3.2 and 3.2.1   Erik Lindahl
• [gmx-users] simulated annealing   davide.ruffoni
• [gmx-users] water density   sadhna
• [gmx-users] problem with Cesium   parinald at unsl.edu.ar
• [gmx-users] water handling   Ken Rotondi
  • [gmx-users] water handling   Nguyen Hoang Phuong
    • [gmx-users] water handling   Ken Rotondi
      • [gmx-users] Extracting energy from trajectory file   Sandeep Somani
      • [gmx-users] water handling   Nguyen Hoang Phuong
• [gmx-users] mdrun, Segmentation Error   Farshid Mostowfi
• [gmx-users] Energy of a Protein Structure   Gaurav Porwal
  • [gmx-users] number of contact   Li Xiaoyi
    • [gmx-users] number of contact2--please help   Li Xiaoyi
• [gmx-users] Fatal error, please help   Hua Wong
  • [gmx-users] Fatal error, please help   David van der Spoel
• [gmx-users] Fatal error, please help (2)   Hua Wong
  • [gmx-users] Fatal error, please help (2)   Anton Feenstra
    • [gmx-users] Fatal error, please help (2)   Hua Wong
• [gmx-users] scaling on xeons   Y U Sasidhar
  • [gmx-users] scaling on xeons   Anton Feenstra
    • [gmx-users] scaling on xeons   David van der Spoel
• [gmx-users] Monitoring E-field   Vincent Lemaitre
• [gmx-users] lam 7.0.4   Y U Sasidhar
  • [gmx-users] lam 7.0.4   Anton Feenstra
• [gmx-users] restarting jobs   Marc Vogt
  • [gmx-users] restarting jobs   Martina Bertsch, PhD
• [gmx-users] about the origin of parameters in lipid.itp   Luca Mollica
• [gmx-users] huge fluctuation about potential energy: can I reduce it?   Lixian Zhang
• [gmx-users] How to make ADP parameters   Zhiguo Liu
• [gmx-users] mpicc build problems - /usr/bin/ld: BFD 2.11.93.0.2 20020207 assertion fail elf-strtab.c:262   Cliff Addison
  • [gmx-users] mpicc build problems - /usr/bin/ld: BFD 2.11.93.0.2 20020207 assertion fail elf-strtab.c:262   Erik Lindahl
• [gmx-users] Re: restarting jobs   Linda
  • [gmx-users] Re: restarting jobs   Martina Bertsch, PhD
  • [gmx-users] Re: restarting jobs   Marc Vogt
    • [gmx-users] Re: restarting jobs   Marc Vogt
• [gmx-users] Re: restarting jobs, again   Linda
• [gmx-users] aggregation   Raghunadha Reddy Burri
  • [gmx-users] Re: aggregation   Raghunadha Reddy Burri
    • [gmx-users] Re: aggregation   SANTINI sebastien
      • [gmx-users] Re: aggregation   Raghunadha Reddy Burri
• [gmx-users] More than 99999 atom   Ing. Vojtěch Spiwok
  • [gmx-users] More than 99999 atom   Erik Lindahl
• [gmx-users] umbrella sampling   Pedro Alexandre Lapido Loureiro
• [gmx-users] hydroxy oxygen in lipid   medeawan at sohu.com
• [gmx-users] hydroxy oxygen in lipid   medeawan at sohu.com
• [gmx-users] Gromacs force field with phosphorylated residues modeled   Zhiguo Liu
• [gmx-users] ions, reaction field, integration step   Santi Esteban Martin
• [gmx-users] dipolar moment   Ruben Martinez Buey
  • [gmx-users] dipolar moment   Dallas Warren
• [gmx-users] compiling 3.2(.1) with --disable-nice   Pim Schravendijk
• [gmx-users] coordinate file with charges   Andrea Hombrecher
  • [gmx-users] coordinate file with charges   Marcos Villarreal
• [gmx-users] Re: restarting jobs   Wei Fu
  • [gmx-users] Re: restarting jobs   Marc Vogt
    • [gmx-users] Re: restarting jobs   David
    • [gmx-users] periodic boundary conditions   Marc Vogt
      • [gmx-users] periodic boundary conditions   David van der Spoel
      • [gmx-users] Salt Bridge!   ankur gupta
      • [gmx-users] Salt Bridge!   Ran Friedman
      • [gmx-users] Salt Bridge!   Xavier Periole
• [gmx-users] .xtc file not portable?   Jee E Rim
  • [gmx-users] .xtc file not portable?   Erik Lindahl
    • [gmx-users] .xtc file not portable?   Y U Sasidhar
• [gmx-users] Re:.xtc file not portable?   Jee E Rim
  • [gmx-users] Re:.xtc file not portable?   Nuno Ricardo Loureiro Ferreira
• [gmx-users] water resident time   neda mirsamadi
• [gmx-users] Why does total energy fall down??   Ane Xu
  • [gmx-users] Why does total energy fall down??   Dallas Warren
• [gmx-users] Charmm parameter   Keta Jones
• [gmx-users] condensing   Derrick Guang Yuh Lee
  • [gmx-users] condensing   Dallas Warren
• [gmx-users] (no subject)   Mungikar, Amol Arvind (UMR-Student)
  • [gmx-users] RE:   Ilya Chorny
• [gmx-users] density   sadhna
• [gmx-users] ADP topology parameter   Zhiguo Liu
  • [gmx-users] ADP topology parameter   Daan van Aalten
• [gmx-users] About ADP   Zhiguo Liu
  • [gmx-users] About ADP   Daan van Aalten
  • [gmx-users] About ADP   Eric Jakobsson
• [gmx-users] pressure scaling   sadhna
  • [gmx-users] pressure scaling   Ilya Chorny
• [gmx-users] RE:   Mungikar, Amol Arvind (UMR-Student)
• [gmx-users] pressure scaling   Mungikar, Amol Arvind (UMR-Student)
• [gmx-users] pressure scaling   sadhna
• [gmx-users] density   Dallas Warren
• [gmx-users] water density   Eric Jakobsson
• [gmx-users] Daer All , Could you give me an example for AFM pulling ?   王 焰增
• [gmx-users] input for membrane   Carl-Johan Högberg
• [gmx-users] dihedral restraints   Lakshmi Padmavathi
  • [gmx-users] dihedral restraints   David van der Spoel
• [gmx-users] MD Simulation/Gromacs -course material   Anu Tervo
• [gmx-users] mpicc build problems - /usr/bin/ld: BFD 2.11.93.0.2   Cliff Addison
• [gmx-users] ADP topology parameter   Ruben Martinez Buey
• [gmx-users] Problems for restarting a job after 10ns run   Yuhua Song
  • [gmx-users] Problems for restarting a job after 10ns run   tamara-frembgenkesner at uiowa.edu
    • [gmx-users] Problems for restarting a job after 10ns run   Yuhua Song
      • [gmx-users] Gold layers   Keta Jones
      • [gmx-users] Gold layers   Peter Zoon
      • [gmx-users] Gold layers   Keta Jones
      • [gmx-users] Gold layers   Peter Zoon
      • [gmx-users] Gold layers   Keta Jones
      • [gmx-users] Gold layers   David van der Spoel
      • [gmx-users] Gold layers   Peter Zoon
• [gmx-users] ADP topology parameter   Zhiguo Liu
• [gmx-users] PME   sadhna
  • [gmx-users] PME   Ran Friedman
    • [gmx-users] Solvation Free Energy using PME   Ilya Chorny
    • [gmx-users] PME   Michael Brunsteiner
      • [gmx-users] PME   Ran Friedman
• [gmx-users] mean squared deviation of com   Patel Ronak Y
  • [gmx-users] mean squared deviation of com   David van der Spoel
• [gmx-users] PME or RF: ions   Santi Esteban Martin
• [gmx-users] Solvation Free Energy using PME   Nagy, Peter I.
  • [gmx-users] switching function and NPT   Ilya Chorny
• [gmx-users] md simulation crashes with timestep higher than 0.1ps   Bamidele Adisa
  • [gmx-users] md simulation crashes with timestep higher than 0.1ps   David van der Spoel
• [gmx-users] G_MINDIST Question   Anthony Ivetac
  • [gmx-users] G_MINDIST Question   David
• [gmx-users] PME   sadhna
  • [gmx-users] targeted molecular dynamics   Ruben Martinez Buey
• [gmx-users] Re: md simulation crashes with timestep higher than   Bamidele Adisa
  • [gmx-users] Re: md simulation crashes with timestep higher than   Zhen Qin
• [gmx-users] [Fwd: Segmentation Error]   David
  • [gmx-users] creating topology   Ilya Chorny
• [gmx-users] Re: md simulation crashes with timestep higher than 0.1ps   Bamidele Adisa
  • [gmx-users] Re: md simulation crashes with timestep higher than 0.1ps   David
• [gmx-users] Calculate heat capacity   Jia-Lin Lo
  • [gmx-users] Calculate heat capacity   Ilya Chorny
    • [gmx-users] Calculate heat capacity   Jia-Lin Lo
      • [gmx-users] Calculate heat capacity   Ilya Chorny
      • [gmx-users] Calculate heat capacity   David
      • [gmx-users] umbrella sampling   Ilya Chorny
      • [gmx-users] Calculate heat capacity   Jia-Lin Lo
      • [gmx-users] Calculate heat capacity   David van der Spoel
    • [gmx-users] Azo-Parameters   Lars Scha"fer
• [gmx-users] MD Simulation/Gromacs -course material   Osmany Guirola Cruz
• [gmx-users] TMD   Ruben Martinez Buey
• [gmx-users] Re: Segmentation Error   Pim Schravendijk
• [gmx-users] missing residues   Yu Sun (Denis)
  • [gmx-users] compressibility chloroform?   Peter Zoon
    • [gmx-users] compressibility chloroform?   Rainer Boeckmann
      • [gmx-users] compressibility chloroform?   Peter Zoon
• [gmx-users] missing residues   Yu Sun (Denis)
• [gmx-users] missing residues   Yu Sun (Denis)
  • [gmx-users] missing residues   Nuno R. L. Ferreira
  • [gmx-users] missing residues   David
    • [gmx-users] missing residues   Kay Gottschalk
• [gmx-users] Gromacs 3.2.1 compilation programs on SGI   Ran Friedman
  • [gmx-users] Gromacs 3.2.1 compilation programs on SGI   ran friedman
    • [gmx-users] Gromacs 3.2.1 compilation programs on SGI   Bert de Groot
      • [gmx-users] Gromacs 3.2.1 compilation programs on SGI   ran friedman
      • [gmx-users] Gromacs 3.2.1 compilation programs on SGI   Bert de Groot
• [gmx-users] CNT (.top) and (.gro) files   Dr. Ramón Garduño-Juárez
• [gmx-users] How to control 1-5 interaction   Makoto Yoneya
  • [gmx-users] How to control 1-5 interaction   David van der Spoel
• [gmx-users] rmsd matrix from g_cluster   Dr. Christoph Freudenberger
  • [gmx-users] rmsd matrix from g_cluster   Raghunadha Reddy Burri
    • [gmx-users] rmsd matrix from g_cluster   Dr. Christoph Freudenberger
      • [gmx-users] rmsd matrix from g_cluster   Raghunadha Reddy Burri
      • [gmx-users] Pls Guide!   ankur gupta
      • [gmx-users] Pls Guide!   Nuno R. L. Ferreira
  • [gmx-users] Help Solid layers   Keta Jones
• [gmx-users] How to specify cpp in Windows and ......?   xiaobing tian
  • [gmx-users] How to specify cpp in Windows and ......?   Nuno R. L. Ferreira
    • [gmx-users] How to specify cpp in Windows and ......?   xiaobing tian
• [gmx-users] Opteron-Bug   Thomas Veith
  • [gmx-users] Opteron-Bug   David
    • [gmx-users] Opteron-Bug   Erik Lindahl
• [gmx-users] do_dssp with no output!   Elena Molteni
  • [gmx-users] do_dssp with no output!   Marc Vogt
• [gmx-users] Re: Gold layers   David
  • [gmx-users] Re: Gold layers   Keta Jones
    • [gmx-users] Re: Gold layers   David van der Spoel
      • [gmx-users] top file for Gold   Keta Jones
      • [gmx-users] top file for Gold   kamil at ibmb.uni.wroc.pl
    • [gmx-users] Re: Gold layers   Nuno R. L. Ferreira
• [gmx-users] Re: Re: msd of com of bilayer   Patel Ronak Y
  • [gmx-users] Re: Re: msd of com of bilayer   David van der Spoel
• [gmx-users] Buckingham potentials and LJ   Stefano Piana
• [gmx-users] 1-4 interaction at distance larger than 1   Makoto Yoneya
  • [gmx-users] 1-4 interaction at distance larger than 1   Michael Brunsteiner
• [gmx-users] Occupancy warning   Zhiguo Liu
  • [gmx-users] Occupancy warning   David van der Spoel
• [gmx-users] Bob Arenburg/Austin/IBM is out of the office.   Bob Arenburg
• [gmx-users] how do u convert .xvg figures to .eps?   Mario Orsi
  • [gmx-users] how do u convert .xvg figures to .eps?   Marc Lensink
    • [gmx-users] how do u convert .xvg figures to .eps?   Mario Orsi
      • [gmx-users] how do u convert .xvg figures to .eps?   Marc Lensink
    • [gmx-users] question about image   Weihua Guo
      • [gmx-users] question about image   David
      • [gmx-users] question about image   Weihua Guo
      • [gmx-users] question about image   David
  • [gmx-users] how do u convert .xvg figures to .eps?   Marcos Villarreal
    • [gmx-users] how do u convert .xvg figures to .eps?   Mario Orsi
• [gmx-users] Precipitation of small peptides   Jorge Hernanez Fernandez
• [gmx-users] Re: What is wrong with my .top file?   xiaobing tian
  • [gmx-users] Re: What is wrong with my .top file?   Nuno R. L. Ferreira
    • [gmx-users] Re:   xiaobing tian
      • [gmx-users] getting started   Maria Sabaye Moghaddam
    • [gmx-users] Fatal error from mdrun   xiaobing tian
    • [gmx-users] Re: Fatal error from mdrun, again   xiaobing tian
      • [gmx-users] Re: Fatal error from mdrun, again   Xavier Periole
      • [gmx-users] Still get fatal error from mdrun!   xiaobing tian
      • [gmx-users] Still get fatal error from mdrun!   Xavier Periole
      • [gmx-users] Still get fatal error from mdrun!   Nuno R. L. Ferreira
• [gmx-users] pH   Madhuri Agashe
  • [gmx-users] pH   Dallas Warren
    • [gmx-users] pH   Ilya Chorny
      • [gmx-users] pH   kamil at ibmb.uni.wroc.pl
• [gmx-users] pH calculation   kamil at ibmb.uni.wroc.pl
• [gmx-users] g_hbond 3.2 problems   Simakov Nikolay
• Antw: [gmx-users] how do u convert .xvg figures to .eps?   Peter Friedel
  • Antw: [gmx-users] how do u convert .xvg figures to .eps?   David van der Spoel
• [gmx-users] pull code: constraint forces   davide.ruffoni
• [gmx-users] pull code: constraint forces   Berk Hess
• [gmx-users] pull code: constraint forces   davide.ruffoni
• Wtrlt: Re: Antw: [gmx-users] how do u convert .xvg figures to .eps?   Peter Friedel
  • Wtrlt: Re: Antw: [gmx-users] how do u convert .xvg figures to .eps?   Rainer Boeckmann
  • Wtrlt: Re: Antw: [gmx-users] how do u convert .xvg figures to .eps?   David
• [gmx-users] A question on x, y axis of order parameters (g_order)   Hwankyu Lee
  • [gmx-users] A question on x, y axis of order parameters (g_order)   David
• [gmx-users] Analysis of data   Maria Sabaye Moghaddam
  • [gmx-users] Analysis of data   David
• [gmx-users] strange mesage   tanos at ime.eb.br
  • [gmx-users] strange mesage   David
  • [gmx-users] RE: strange mesage   Martina Bertsch, PhD
• [gmx-users] Posre.itp during pre equilibration   statk002 at fiu.edu
• [gmx-users] Nuno and Xavier   xiaobing tian
  • [gmx-users] Nuno and Xavier   Nuno R. L. Ferreira
• [gmx-users] interrupting mdrun; queuing   Martina Bertsch, PhD
  • [gmx-users] interrupting mdrun; queuing   David van der Spoel
    • [gmx-users] interrupting mdrun   Martina Bertsch, PhD
      • [gmx-users] interrupting mdrun   David
• Antw: Re: Wtrlt: Re: Antw: [gmx-users] how do u convert .xvg figures to.eps?   Peter Friedel
  • Antw: Re: Wtrlt: Re: Antw: [gmx-users] how do u convert .xvg figures to.eps?   David van der Spoel
• Antw: Re: Wtrlt: Re: Antw: [gmx-users] how do u convert .xvg figures to.eps?   Peter Friedel
• [gmx-users] Energy minimisation with TIP4P   Ran Friedman
• [gmx-users] pull code: constraint forces   Berk Hess
• [gmx-users] Re: no altivec support found when compiling on macosx G5 gcc 3.3   Pim Schravendijk
• [gmx-users] no altivec support found when compiling on macosx G5 gcc 3.3   Pim Schravendijk
  • [gmx-users] no altivec support found when compiling on macosx G5 gcc 3.3   Erik Lindahl
• [gmx-users] H-bond in UA   Henrik Rundgren
  • [gmx-users] H-bond in UA   David L. Bostick
• [gmx-users] PRODRG atom number limit   hugo verli
  • [gmx-users] PRODRG atom number limit   Daan van Aalten
• [gmx-users] targeted molecular dynamics   Ruben Martinez Buey
• [gmx-users] targeted molecular dynamics   Berk Hess
• [gmx-users] Re: no altivec support found when compiling on macosx G5 gcc 3.3   Pim Schravendijk
• [gmx-users] mdrun_hole   Shrivastava, Indira (NIH/NCI)
• [gmx-users] Fatal error: Atomtype 'IW' not found!   Bamidele Adisa
  • [gmx-users] Fatal error: Atomtype 'IW' not found!   David
• [gmx-users] sugar building blocks   hugo verli
  • [gmx-users] sugar building blocks   David
• [gmx-users] [Help] Water polarizabilty!   Yinghong
  • [gmx-users] [Help] Water polarizabilty!   David
• [gmx-users] How to calculate the number of salt ions?   Yinghong
  • [gmx-users] How to calculate the number of salt ions?   Vivek Raut
  • [gmx-users] How to calculate the number of salt ions?   David
• [gmx-users] Problem with energy minimisations using TIP4P   Ran Friedman
• [gmx-users] Re: PRODRG atom number limit   Ing. Vojtěch Spiwok
• [gmx-users] interrupting mdrun   Berk Hess
• [gmx-users] g_order   Itamar Kass
• [gmx-users] Re: gmx-users digest, Vol 1 #1348 - 5 msgs   Kia Balali-Mood
• [gmx-users] outputting coordinates in each time frame?   hi hello
  • [gmx-users] outputting coordinates in each time frame?   David van der Spoel
• [gmx-users] g_rms and pbc   Alan Wilter Sousa da Silva
  • [gmx-users] g_rms and pbc   David van der Spoel
• [gmx-users] rolling effect   Madhuri Agashe
• [gmx-users] cotinu   neda mirsamadi
  • [gmx-users] cotinu   David van der Spoel
• [gmx-users] renicing under windows, moving frozen atoms, some observations and a question   Michael Brunsteiner
• [gmx-users] continuerun   gold gunaseelan
  • [gmx-users] continuerun   Tsjerk Wassenaar
• [gmx-users] Re: mdrun_hole   Graham Smith
• [gmx-users] Problem With Gromacs on Mac OS 10.2   Chris Ryan
  • [gmx-users] Problem With Gromacs on Mac OS 10.2   Itamar Kass
• [gmx-users] GROMACS available on VigyaanCD   Pratul K. Agarwal
  • [gmx-users] GROMACS available on VigyaanCD   David
    • [gmx-users] GROMACS available on VigyaanCD   Pratul K. Agarwal
• [gmx-users] hydration of bilayer?   Carl-Johan Högberg
  • [gmx-users] hydration of bilayer?   Marcos Villarreal
• [gmx-users] Counting particles in a particular region   Steven Spronk
  • [gmx-users] Counting particles in a particular region   David
  • [gmx-users] Counting particles in a particular region   David L. Bostick
  • [gmx-users] Counting particles in a particular region   Oliver Beckstein
• [gmx-users] Re: continuerun   gold gunaseelan
  • [gmx-users] Re: continuerun   T.A.Wassenaar at chem.rug.nl
• [gmx-users] how can I get the force field of polyphosphate in Gromos 96 43a2!   吴显辉
• [gmx-users] force field for polyphosphate!   nanyu101 at sina.com
  • [gmx-users] force field for polyphosphate!   David
• [gmx-users] Bob Arenburg/Austin/IBM is out of the office.   Bob Arenburg
• [gmx-users] Planar group (again)   Coincon Mathieu
  • [gmx-users] Planar group (again)   David
• [gmx-users] Normal Modes   Dana Dogaru
• [gmx-users] Extending an mdrun with trr >2GB   Martina Bertsch, PhD
  • [gmx-users] Extending an mdrun with trr >2GB   Peter Zoon
    • [gmx-users] Extending an mdrun with trr >2GB   Martina Bertsch, PhD
      • [gmx-users] Extending an mdrun with trr >2GB   David
      • [gmx-users] Extending an mdrun with trr >2GB   Martina Bertsch, PhD
      • [gmx-users] Extending an mdrun with trr >2GB   David
• [gmx-users] question about g_rmsdist?   Lishan Yao
• [gmx-users] phosphate ion force field again!   nanyu101 at sina.com
• [gmx-users] Discussion about packages like dl_poly, moldy, charmm etc..   Keta Jones
• [gmx-users] Re: GROMACS available on VigyaanCD   Ing. Vojtěch Spiwok
• [gmx-users] Gromos force field for DNA and RNA!   nanyu101 at sina.com
• [gmx-users] Extending an mdrun with trr >2GB   Berk Hess
  • [gmx-users] Atomtype 'C' not found!   Raghunadha Reddy Burri
• [gmx-users] order parameters   Kia Balali-Mood
• [gmx-users] order parameters....please ignore previous message   Kia Balali-Mood
• [gmx-users] pair of amino acid   Amol Mungikar
  • [gmx-users] Re: [gmx-users]Missing disulfide bonds and LINCS Warning!   xiaobing tian
    • [gmx-users] Re: [gmx-users]Missing disulfide bonds and LINCS Warning!   David
      • [gmx-users] Re: [gmx-users]Missing disulfide bonds and LINCS Warning!   xiaobing tian
      • [gmx-users] Re: [gmx-users]Missing disulfide bonds and LINCS Warning!   David
      • [gmx-users] How to edit the specbond.dat file?   xiaobing tian
      • [gmx-users] How to edit the specbond.dat file?   David
      • [gmx-users] How to edit the specbond.dat file? Again   xiaobing tian
      • [gmx-users] How to edit the specbond.dat file? Again   Dallas Warren
      • [gmx-users] How to edit the specbond.dat file? Again   xiaobing tian
      • [gmx-users] How to edit the specbond.dat file? Again   Dallas Warren
      • [gmx-users] besides compiling it...   xiaobing tian
      • [gmx-users] besides compiling it...   David
      • [gmx-users] Thank you   xiaobing tian
      • [gmx-users] 15-20% tolerance?   xiaobing tian
      • [gmx-users] 15-20% tolerance?   David
      • [gmx-users] Whics is correct coordinate file for enditing?   xiaobing tian
      • [gmx-users] Whics is correct coordinate file for enditing?   David
  • [gmx-users] Re: [gmx-users]Missing disulfide bonds and LINCS Warning!   xiaobing tian
  • [gmx-users] pair of amino acid   David
• [gmx-users] Obtaining energies from trr files   Chng Choon Peng
  • [gmx-users] Obtaining energies from trr files   David
  • [gmx-users] Obtaining energies from trr files   David
    • [gmx-users] Obtaining energies from trr files   Chng Choon Peng
• [gmx-users] phosphate ion force field again!   nanyu101 at sina.com
• [gmx-users] Gromos force field for DNA and RNA!   nanyu101 at sina.com
• [gmx-users] RE: phosphate ion force field again!   Ing. Vojtěch Spiwok
• [gmx-users] RE: phosphate ion force field again!   nanyu101 at sina.com
• [gmx-users] topol.tpr not found   effe_kri at virgilio.it
  • [gmx-users] topol.tpr not found   Nuno R. L. Ferreira
• [gmx-users] Atomtype 'C' not found!   David van der Spoel
• [gmx-users] about Force Field   parinald at unsl.edu.ar
• [gmx-users] Force Fields and Electrostatics   Dallas Warren
  • [gmx-users] Force Fields and Electrostatics   David van der Spoel
• [gmx-users] RB potential in 43a1   Patel Ronak Y
• [gmx-users] reference simulations?   Arvid Soderhall
• [gmx-users] It seems that at least one rank invoked some MPI function before invoking MPI_INIT. The only information that I can give is that   Li Dawei
• [gmx-users] RE: phosphate ion force field again!   Ing. Vojtěch Spiwok
• [gmx-users] (no subject)   Nikita Polyakov
  • [gmx-users] (no subject)   Erik Lindahl
• [gmx-users] 2 fs time step??   Vivek Raut
  • [gmx-users] 2 fs time step??   Erik Lindahl
• [gmx-users] SPC216 bonds??   Vivek Raut

Last message date: Wed Mar 31 20:23:01 CEST 2004
Archived on: Thu Nov 14 12:00:44 CET 2013

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