[gmx-users] periodic boundary conditions

[Marc Vogt]

I'm trying to run simulations with periodic boundary conditions and recently
found the follwing lines in my .log file

Removing pbc first time
Done rmpbc


I have pbc = xyz in the mdp file

are the periodic conditions being turned off?
do I need to set set GMXFULLPBC equal to 1?  What is the purpose of this
environment variable?  I can't find it in the manual (3.2) appendix.
Is it no longer an environment variable in 3.2?


thanks,

Marc