[gmx-users] [Help] Water polarizabilty!
David
spoel at xray.bmc.uu.se
Wed Mar 24 08:24:01 CET 2004
On Wed, 2004-03-24 at 03:42, Yinghong wrote:
> Dear users:
>
> While simulation, I noted that I am quite confused with the concept
> "water polarizability". As known, the choice of water model probably
> influence the dynamics properties of system.
>
> I wanna know under what case should we include the explicit
> polarizability into water model? How about my simulation, DNA-Protein
> interactions?
Would be good, but there are no complete polarizable force fields for
proteins and/or dna yet.
>
> Thanks a lot!
>
>
>
> Regards
>
> Xie YH
>
> xieyh at hkusua.hku.hk
>
>
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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