[gmx-users] (no subject)
Nikita Polyakov
burnnick_g at rambler.ru
Wed Mar 31 14:33:01 CEST 2004
Hello all!
I'm trying to convert Amber dihedral constants to ffoplsaabon.itp.
I took opls_parm.dat from Amber7 force field and extact that line for
try:
X -CK-CB-X 4 5.3 180. 2.
Supposed dihedral is:
C2=-5.565
In that case probably C0 = -C2 = 5.565. So C1=C3=C4=C5=0
X CA C X 3 5.565 0.00000 5.565
0.00000 0.00000 0.00000
But in ffoplsaabon.itp for example:
CA CA C N 3 4.60548 0.00000 -4.60548
0.00000 0.00000 0.00000 ; benzamide
Could you explain difference or where I did mistake?
Nikita Polyakov, MSU student.
More information about the gromacs.org_gmx-users
mailing list